Pseudomonas promysalinigenes: HU725_017220
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Entry
HU725_017220 CDS
T07662
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pprg
Pseudomonas promysalinigenes
Pathway
pprg01501
beta-Lactam resistance
pprg02020
Two-component system
Module
pprg_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU725_017220
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HU725_017220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprg02000
]
HU725_017220
01504 Antimicrobial resistance genes [BR:
pprg01504
]
HU725_017220
Transporters [BR:
pprg02000
]
Other transporters
Pores ion channels [TC:
1
]
HU725_017220
Antimicrobial resistance genes [BR:
pprg01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
HU725_017220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
NfeD1b_N
Motif
Other DBs
NCBI-ProteinID:
QXI32746
LinkDB
All DBs
Position
3796652..3797926
Genome browser
AA seq
424 aa
AA seq
DB search
MRVMKWSMIALAVAAGTSQMAVASSQDESKGFLEDSKLNVKTRMLYFSRDFRNNAPGSQS
RVEETGLGFLGTYESGFTQGTVGVGIDAIGMLGLKLDSGKGRHSTGQFPTDADGRAQDEF
SEGGGAVKLRISDTVLKVGDQFTAMPVFATDDSRLLPEVAQGALITSSEIKGLTLNAGRF
TALNAQSQTFHDSLHLKEADVIGGTYAFTDNVSTSLYYSKVEDYWRKYYANVNWALPLSD
KQGLVFDFNIYDTKSDGQGLQRAEKDGVTKLDNRAFSLSGAYNIGAHTFTLAYQKVTGDG
DYGYGVDGGGTIFLANSVARSDFNAEDEKSWQARYDLNFAEYGVPGLTFMTRYVRGSDAN
TGSTSNGKEWERDVDVKYVLQEGPAKDLSFRVRQATYRSSDGVYYGSSSIDELRLIVEYP
LSIL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgccctggccgttgcggcagggacctcgcagatg
gccgtagcctcgtcccaggacgaatccaagggcttcctcgaagacagcaagctgaacgtc
aagactcgcatgctgtatttcagccgcgatttccgtaacaacgcgccaggctctcaaagc
cgcgtggaagaaaccggccttggtttcctgggcacctatgagtctggttttacccaaggc
accgtcggtgtgggtatcgatgccatcggcatgctcggcctgaaactcgacagcggcaaa
ggccgccacagcaccggccagttcccgactgacgccgatggccgtgcccaggatgaattc
tccgaaggcggcggcgcagtcaagctgcgcatctccgataccgtgctgaaagtcggcgat
cagttcactgccatgccagtgttcgccaccgatgacagccgcttgctgccagaggtagcc
caaggcgctctgatcaccagcagcgaaatcaagggcctgaccctgaacgccggccgcttc
accgcgctgaacgctcagtcccagaccttccatgacagcctgcaccttaaagaagccgac
gtcattggtggcacctatgccttcaccgacaacgtttccaccagcctgtactactccaag
gtcgaagactactggcgcaagtactacgccaacgtgaactgggctctgccactctcggac
aagcaaggcctggtgttcgacttcaacatctatgacaccaaaagcgatggccagggcctg
cagcgcgccgagaaagatggcgtgaccaagctcgacaaccgcgccttcagcctgtccggc
gcctataacatcggcgctcacaccttcaccctggcctatcagaaagtcaccggcgacggc
gactacggctacggcgtggacggcggcggcaccatcttcctggccaactccgtggcccgt
tccgacttcaacgctgaagacgaaaaatcctggcaggctcgctacgacctgaacttcgcc
gaatacggcgtgccaggcctgaccttcatgacccgttacgtacgtggtagcgatgccaac
accggttccaccagcaatggcaaggaatgggaacgtgacgtagacgtcaagtacgtgctg
caagaaggcccagccaaggacctgagcttccgcgtgcgtcaggctacctaccgctccagc
gatggcgtttactacggttcgagctcgatcgacgaactgcgcctgatcgtcgagtacccg
ctgagcatcctgtaa
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