Pseudomonas promysalinigenes: HU725_017470
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Entry
HU725_017470 CDS
T07662
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pprg
Pseudomonas promysalinigenes
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprg03016
]
HU725_017470 (truD)
Enzymes [BR:
pprg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HU725_017470 (truD)
Transfer RNA biogenesis [BR:
pprg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HU725_017470 (truD)
Prokaryotic type
HU725_017470 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QXI32789
LinkDB
All DBs
Position
complement(3844505..3845563)
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AA seq
352 aa
AA seq
DB search
MTELDLLGPRATGQSLGSAVLKAVAEDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAA
RRLARAAGVPVRSISYAGLKDRQALTRQWFSLHLPGKADPDLARAQDDTLRILKQVRHQR
KLQRGAHSANGFTLRLTALAADRQALDARLEQLKRQGVPNYFGTQRFGHGGGNVHDAQGW
AARRALPEQRNVRSRLLSAARSYVFNQVLAARVADGSWQRAQVGDLLAFTDSRSFFQAGE
QECCDPRLSILDLHPTGPLWGQGPSPAAEATCALETAIGERHAALCQWLADAGMDHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVVVRELVDLVPAGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggacttgctgggcccgcgggccacgggccaatcgttgggcagcgccgtg
ctcaaggccgtggctgaagacttccaggtcgacgaggtactggacatcccgctgtcaggt
cagggcgagcacctgtggttgtgggtcgagaagcgtgatctcaataccgaagaggctgcc
cgccggctggcccgcgctgccggtgtgccagtgcgctctatcagctatgccgggctcaag
gaccgccaggccttgacccggcagtggttcagcctgcacctgccgggcaaggccgacccg
gatctggcacgggctcaagacgataccctgcgcatcctcaagcaggtgcgccaccagcgc
aaactgcagcgaggtgcccattcggccaatggcttcaccctgcgcctgaccgcgctggcg
gctgatcgtcaggccctcgatgctcggttggaacaactcaagcgacaaggggtgcccaac
tactttggtacccagcgattcggccatggcggtggcaatgtccacgatgctcagggctgg
gccgcccgccgggctttgccggagcaacgcaacgtgcgctcgcgcctgctgtcggcagcg
cgcagctatgtgttcaaccaggtactggcggcacgtgtagccgatggcagctggcagcgc
gcacaagttggagacctgctggcgtttaccgatagccgtagctttttccaagcaggcgag
caggaatgttgcgatcctcgtttgagcattcttgatctgcaccccaccggccccttgtgg
gggcaggggccgtcgcctgcggctgaggcgacttgcgcgctggagacagcgataggcgag
cgtcacgcggcgctgtgccaatggctcgccgatgcgggcatggatcacgaacggcgaata
ctgcggctccctattggcggcctgacgtggcattatcccgagcctgatatcctgcaactg
gaattcgtccttccggccggatgcttcgccaccgtggtggtgcgcgagcttgttgatctg
gtgccggcagggcagacggacagcccatgcgtattctga
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