Pseudomonas promysalinigenes: HU725_019570
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Entry
HU725_019570 CDS
T07662
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pprg
Pseudomonas promysalinigenes
Pathway
pprg00260
Glycine, serine and threonine metabolism
pprg00460
Cyanoamino acid metabolism
pprg00630
Glyoxylate and dicarboxylate metabolism
pprg00670
One carbon pool by folate
pprg00680
Methane metabolism
pprg01100
Metabolic pathways
pprg01110
Biosynthesis of secondary metabolites
pprg01120
Microbial metabolism in diverse environments
pprg01200
Carbon metabolism
pprg01230
Biosynthesis of amino acids
pprg01240
Biosynthesis of cofactors
pprg04981
Folate transport and metabolism
Module
pprg_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HU725_019570
09102 Energy metabolism
00680 Methane metabolism
HU725_019570
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HU725_019570
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HU725_019570
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HU725_019570
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HU725_019570
Enzymes [BR:
pprg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HU725_019570
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
QXI33191
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Position
4314553..4315806
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDAELFEAMQQEALRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDGNGLIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARKNEEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMAEV
FIERGFDVVSGGTQNHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECRELAGWICDILADLNNETVIDAVREKVKAICKKLPVYGN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaccattgccaagtacgacgccgagctcttcgaagccatgcag
caagaagccctgcgccaggaagagcatatcgagctgatcgcttcggaaaactacaccagc
ccggcagtcatggaagcccagggctcggtcctgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggtggctgcgaatacgtcgacgtggtcgagcaactggccatcgac
cgtgccaaggagctgttcggcgctgactacgccaacgttcagccacacgcaggctcgcaa
gccaacgccgcggtctacctggcgctgctgtcggccggtgacaccatcctgggcatgagc
ctggcccacggcggccacctgacccacggtgcttcggtcagctcttcgggcaagctgtac
aacgccatccagtacggcatcgacggcaacggcctgatcgactacgacgaagtcgagcgc
ctggccgtcgagcacaagccgaaaatgatcgttgccggcttctcggcctactcgcaggtt
ctggacttcgcccgcttccgcgccatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgttgccggcctggttgccgctggcgtctacccgaacccagtgccattcgcc
gacgtggtcaccaccaccactcacaagaccctgcgcggcccacgtggtggcctgatcctc
gctcgcaagaacgaagagatcgagaagaagctgaactccgccgtcttccctggtgcccag
ggtggcccgctggagcacgtgatcgctgccaaggccatctgcttcaaggaagccctgcag
cctgagttcaaggcttaccagcagcaggtagtgaaaaacgcccaggccatggccgaagtg
ttcatcgagcgtggtttcgatgtggtatccggtggtacccagaaccacctgttcctgttg
tcgctgatcaagcaggaaatctccggtaaagatgcagacgctgccctgggcaaagccttc
atcaccgtgaacaagaactcggtcccgaacgacccacgttctccgttcgtcacctcgggc
ctgcgtttcggcaccccagctgtgaccacccgtggtttcaaggaagccgaatgccgcgag
ctggccggctggatctgcgacatcctggccgacctgaacaacgaaacggtgatcgacgct
gtgcgcgagaaggtaaaagccatctgcaagaagctgccggtatacggcaactga
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