Pseudomonas promysalinigenes: HU725_021575
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Entry
HU725_021575 CDS
T07662
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pprg
Pseudomonas promysalinigenes
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprg03021
]
HU725_021575 (rpoH)
Transcription machinery [BR:
pprg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HU725_021575 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QXI33561
LinkDB
All DBs
Position
complement(4770569..4771423)
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AA seq
284 aa
AA seq
DB search
MTTSLQPAYALVPGANLEAYVHTVNSIPLLSVEQERDLAERLYYEQDLEAARQMVMAHLR
FVVHIARSYAGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLSGQD
MAFDPAAEADDDSAFQSPAHYLEDHRYDPAVQLEDADWSDNSTSNLHEALQGLDDRSRDI
LYQRWLAEEKATLHELAEKYSVSAERIRQLEKNAMNKVKALITI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatcgttgcaacctgcctatgccctggtgcccggtgcaaacctggaagcctat
gtgcacacggtcaacagcatcccgctgttgtctgtcgagcaggagcgtgatctggccgag
cgtctctattacgagcaggatcttgaggccgctcggcaaatggtgatggcccacctgcgt
ttcgtcgtacatatcgcacgtagctatgctggctacgggctggcccaggccgacctgatc
caggaaggtaacgttggcctgatgaaagcggtaaagcgtttcaaccctgaaatgggtgtg
cgcctggtgtctttcgccgtgcactggatcaaggcagagatccacgagttcatcctgcgc
aactggcgcatcgtcaaggtggctaccaccaaggcgcaacgcaagctgttcttcaacctg
cgtagccagaagaagcgcttggcttggctcaataatgacgaggtgcaccgcgtggctgaa
agcctcggtgttgagccccgtgaagtgcgcgagatggaaagccgcctgagcggccaggac
atggccttcgacccggcggcagaagccgatgacgacagcgcattccagtcgcctgcccat
taccttgaagaccaccgctacgacccggctgtgcagttggaagatgccgactggagtgac
aactccactagcaatctgcacgaagccctgcaagggctggatgatcgcagtcgcgatatc
ctctatcagcgctggttggctgaggaaaaagctaccttgcacgagctggctgagaagtac
agcgtttcggctgagcggatccgccagttggagaagaatgcgatgaacaaggtcaaggcg
ctgatcaccatctga
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