Poeciliopsis prolifica (blackstripe livebearer): 129351065
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Entry
129351065 CDS
T09758
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129351065 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129351065 (herc3)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129351065 (herc3)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
HECT type E3
129351065 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
129351065
NCBI-ProteinID:
XP_054875819
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MLGWGNARDGQLGIGAERNPAFEPRSCHVFSGRGLKEVACGGQHTLFLLHDGSVYTCGSN
SCGQLGHNRDGTSPELVGALDTQKITMVSCGRAHSMAINEQGQVFAWGAGEGGQLGLGTV
EAAVRIPRLVKRLCDHSISQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGEPSKLTP
HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRVGQLGLNDKQDRAVPCHIKFLRS
QKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNNELLPRRVLELMGTEVSQIAC
GRHHTLALVPSSSMVYAFGCNSHGQLGTGILGDSRSPFPVKSSFLTGNLQRRDSKQYTVI
KIICGGDHSFLLYSNEQSSAATADFRVVNVSKSLAPINYEQLNSWRLKLMYNTDSAVAND
IAIQLSSTACWNASFLDQSDDTHFKTNPKIPGIDLNSVRTLFDILSKPAFSGLLEQASKS
FESLLIPQLPRSPPDVEAMRIYLILSEYPALQDSKNYIRLTIPLAMAILRLDANPSKVLD
NWWCFMDGSFFTRMVDMYKRIVVFMLTGGKTILVPVFYDNYFLATLQLLEKLHKVNLRAN
HVEYSRFYIPDISNLVDIQEDYLKWFLTKAEIKMSSSPSQQNDFPSVNLCAFPFILNARA
KTTMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRNHLVSDTLRELTM
YSDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLDPVYGMFTHYKDSNLLWFSDKC
FVEQNWFHLIGIVCGLAIYNSTVVDLHFPLALYKKLLDVSPSLDDFKELSPTEARSLQQL
LDYEGGDVEETFLLNFAITRENYGMTEIKELIPGGESIAVDKNNRKEFVEAYLRYVFSDS
VSEQYSAFSAGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYTATHPT
VRLFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIVIQSTTAEEHYLPVAHTCYNL
LDMPRYQTKETLRRRLTQAVEQYEGFSLV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgctgggctgggggaacgccagggatgggcagctgggcattggcgcggagaggaacccc
gcgtttgagcccaggagctgccatgtgttcagcgggcggggactgaaggaggtcgcgtgc
ggagggcagcacacgctgttcctgctgcacgacggcagcgtttacacgtgtggctccaac
agctgcggacagctgggccacaacagagatgggacgtccccagagctggttggggctctg
gacacccagaagataacgatggtgtcgtgtggccgggcgcattcgatggccatcaatgag
cagggccaggtgttcgcatggggagctggagaaggcgggcagctcggcctggggacggtg
gaggcggctgttcgaatcccaaggctggtgaaaaggctttgtgaccacagcatctcccaa
gtgatgtgtgggaaccagcactgtatcgcactttctagagatggtcagctgttcacttgg
ggtcagaacaccagcggccagctgggtctgggaaaaggggagccgagcaaactgacgcct
catcccctgaagtccctggcagggattcctctggctcagataactgctggaggagaccac
agttttgccctctccttgtcaggagctgtcttcggatggggcaaaaacagggtggggcaa
cttggactgaatgacaaacaagatcgagccgtcccgtgccacatcaagtttctgagatca
cagaaagtcgtttacatcagctgtggagacgaacacaccgcggccctcacaaaggacggg
ggcctgtttacgtttggcgacggctcatggggtcagctgggtcacggctccaccaacaat
gagcttctaccgaggcgcgttctggagctgatgggcactgaggtttcccagatcgcctgt
ggcaggcaccacactctggccttagtcccgtcgtccagcatggtttatgcattcggctgc
aacagccacggccagctgggcacgggaatcctgggcgactcaagaagcccgtttcctgtc
aagtccagcttcctgactggaaacctgcagagaagagattcaaagcaatatacagttata
aaaatcatatgtggaggagaccacagtttcttattgtactccaacgaacagagttctgct
gccacagcggacttcagagtggttaacgtcagtaaaagcctcgcccccatcaactacgaa
cagttaaactcatggagattaaaactgatgtacaacacagactcggctgttgcaaatgac
attgcgatccagctctcctcgacagcctgttggaacgccagcttcctggaccaaagtgat
gacactcacttcaagaccaacccaaagatcccgggtatcgatctcaactcggtcagaacg
ctgtttgacattctcagcaaaccggccttctctggactcctggaacaggcctccaagagt
tttgagagcctgctgatcccccagctgccccgctcgccgccggacgtcgaggccatgagg
atctacctcatcttgtccgagtaccccgccctgcaggactccaagaactacatccgcctc
actattcccctggcaatggctattctccggctagacgccaaccccagcaaagtattggat
aactggtggtgctttatggacggcagcttcttcaccagaatggtggacatgtacaaacgc
atagttgtgttcatgctgacgggcggcaagacgatcctggtgcccgtcttctacgataac
tacttcctggccacgctgcagctgctggagaaactccacaaggtaaacttaagggcgaat
catgtggagtacagtcgcttttatatcccagacatcagcaacctggtggacatccaggag
gactacctcaaatggtttctgactaaagctgagattaaaatgagctcctccccctcacag
cagaacgactttccctcagtgaacctctgtgccttcccgttcatcctgaacgcccgagcc
aagacgacaatgctgcaaacagatgctgaactgcaaatgcagatggccgtcagtggtgca
aacctgcacaacgtcttcatgctgctcacgctggagccccacctggctaggaacccatat
ctggtgctgcatgtgcgcaggaaccatttagtcagtgacacgctgcgggagctcaccatg
tactctgatgtggacctgaagaagcccctcaaggtgatctttgacggcgaggaagccgtc
gacgcaggcggcgtgactaaagagttcttcctgctgctgctaaaggagcttctggatcct
gtttatgggatgttcactcattataaagactccaacctgctgtggttctctgacaaatgt
tttgtggagcagaactggtttcatctgatcgggatcgtctgcggtctggccatctataac
tccactgtggtggatctgcactttcctctggcgctctacaagaagctgctggacgtgtcg
ccttcactggacgatttcaaagagctctcgccgacagaagccaggagtcttcagcaactt
ctagactatgaaggaggcgacgtagaagagacgtttcttctcaactttgctatcaccagg
gaaaactacgggatgacagaaatcaaggagctgattcctggaggagagagcatcgctgtg
gacaaaaacaacaggaaggagtttgtggaggcctacctgcgctacgtgttctccgactcg
gtgagcgaacaatactcggccttctccgccggcttcctgaaagtgtgcggaggggagatc
ctgtcgctgttccagccctctgagctgatggccatggtggtcgggaacaacaactacaac
tgggaggagatggaaaagaacgccgtttacaaaggggagtacaccgccactcacccgaca
gtccgacttttctgggaggttttccacgaattcccgctggagaagaagaagcagttctta
ttgtttctgacgggaagcgaccgcatccccatccacggcatggagagcctccgcatcgtc
atccagtccaccacagcggaggaacactacctgcccgtggctcacacctgctacaacctg
ctggacatgccgcgctaccagaccaaagagacgctgcgccgccgcctgactcaggccgtg
gagcagtacgagggcttcagcctggtctga
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integrated database retrieval system
