Poeciliopsis prolifica (blackstripe livebearer): 129351166
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Entry
129351166 CDS
T09758
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129351166 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129351166 (hbs1l)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129351166 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
129351166
NCBI-ProteinID:
XP_054875984
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDMYGQSVEDDYCISPATANQFIYSRRELHAPKEEPLEEEEY
EDKDVPMSPCVDFNLDPLNQAKLFSCLDHMRAVLGDTVPDSVLTQAAMKHRFDPQRALDA
VLSEDSKTAPVTRSAAEDMPSVGRVAQEQTPLPQRTKQEAVAEKAKSRDAAPDKLDSEVV
PKVARMTVSGKKQTMGFDVPSSGENGVVASPARRGDSPENTKATPVAEPAPKRPETPSKA
SNGDEVSAAATPGRSSGKTRQAINIKAELERRQGGKPLLNLVVIGHVDAGKSTLMGHLLY
LLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTL
MDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLA
VAVNKMDQVNWQEERFREISSKLGHFLKQAGFKESDVFFIPTSGLSGENLTARSTVSELT
SWYSGHSLLEQIDAFKAPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGFIQTGDKMLA
MPPNETCTVKGITLHDEALDWAVAGDHVSLTVTGMDIIKINVGCVFCDPKEPIRVCTRFR
ARILLFNIEVPITQGFPVLLHYQTVSEPATIRKLISVLHKSSGEILKKKPKCLSKGMNAV
VEIQTQRPVSLELYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccacagaaatgttcgaggttacaactacgacgaagactttgaagatgatgac
atgtatggacagtctgtggaggatgactactgcatttcaccagcaacagccaatcagttc
atctattcacgccgagagcttcacgcacccaaagaggagcctctggaggaggaagaatat
gaagataaggatgttcccatgtccccttgtgttgacttcaaccttgaccctcttaatcaa
gcaaagctgttctcctgtctggaccacatgcgagcagtactaggagacacagtgccagac
tccgtcctgacccaggctgcaatgaaacacagatttgatccacagagggctctggatgca
gtgctgtctgaagacagtaaaacagcaccagttaccagaagtgcagcagaagacatgccg
tcagtgggccgagttgcacaagagcagacgcctcttccacagagaaccaagcaggaggcc
gttgctgagaaagcaaaaagcagagatgcggctcctgataaactggactccgaagtggtt
cccaaagtggccaggatgaccgtctctggcaagaagcagactatgggcttcgatgttccc
agctcaggggaaaacggcgttgtcgccagcccagcacggcgaggtgacagccctgaaaac
accaaggcgactccagttgctgagcctgcacccaaacgacccgagaccccatccaaagca
tccaatggagacgaggtctccgccgctgctacaccaggacgctcctctggaaagacgcga
caggcgatcaacatcaaggcagagctggagaggagacaagggggcaaacctctgttaaat
ttagtagttataggtcatgtggatgcaggtaagagcaccctaatgggccacttgctttat
ctgctggggaacgtcaacaagcgcaccatgcacaagtatgaacaggagtcgaaaaaggcc
ggaaaggcctcctttgcctacgcctgggttctggatgaaaccggcgaggagagggacaga
ggggtgacaatggatgtgggcatgacgaagtttgagacaaactctaaggtggtgactcta
atggacgctccgggacacaaagacttcattcccaacatgatcacaggcgctgcacaggct
gatgttgcggtgctcgtggtggacgccagcagaggagagttcgaggcaggctttgaagcc
gggggtcagaccagagagcacgccctgctggtgcgttcgctgggtgtcactcagctggct
gtagctgtaaacaagatggaccaggtaaactggcaagaggagcgtttcagagaaatcagc
tcaaaacttggccattttctaaagcaggcaggattcaaggagtccgatgttttcttcatc
cccaccagtggcctctcaggagaaaatctcactgccagaagcacagtatcagagctgaca
tcttggtacagcggacacagcctgctggagcagattgatgcattcaaagcccctcagcgg
tcaatagacaaacctttcagactgtgcgtctcagatgtgttcaaagatcagggctcaggc
ttctgtgttacagggaagattgaggctggttttattcagacaggagacaaaatgctggca
atgcctcccaatgaaacctgcacagttaaaggaatcactcttcacgacgaggcgctggac
tgggctgtagccggagaccacgtcagcctcacagtcactggaatggacatcatcaagatt
aatgtcggctgtgtgttctgtgatcccaaagagccgattcgagtctgtactcgattcaga
gccagaatcctgctcttcaatatcgaggttcccatcacacaaggctttccagtactgttg
cattaccagacagtcagcgagccggccactattaggaaactgatcagcgttctgcacaag
agcagtggtgaaatcctaaagaaaaagccaaagtgtttgagtaagggtatgaatgcagtt
gtggagattcagacccagaggccggtgtcattagagctgtacaaggactataaagaactg
ggccgcttcatgttgagatacgttggctccaccatcgctgcaggtgtcgtcacagagatc
aaagaatga
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integrated database retrieval system
