Poeciliopsis prolifica (blackstripe livebearer): 129351231
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Entry
129351231 CDS
T09758
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl00100
Steroid biosynthesis
pprl01100
Metabolic pathways
Module
pprl_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
129351231 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pprl01006
]
129351231 (fdft1)
Enzymes [BR:
pprl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
129351231 (fdft1)
Prenyltransferases [BR:
pprl01006
]
Terpene biosynthesis
Squalene/phytoene synthase
129351231 (fdft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
GBP_C
Motif
Other DBs
NCBI-GeneID:
129351231
NCBI-ProteinID:
XP_054876098
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MDSGFVAPPSSVASTWTVSSPNCGLGLFPSGFFRMAGACCKCPASLSVLKRSLSVAPRGC
GSSPPRSVLQGWRRRGERGLQEATRPSSALRTAGFYRQTAFLCLSCQESMSDSLRTCYVY
LNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMTIPLEKKVPMLNNFHTYLYQ
EEWCFTESQEKDRQVLEDFPTISLEFRNLAQEYRDVISDICHRMGVGMAEFLEKKVGSMK
EWDLYCHYVAGLVGIGLSRLFSASQLEDPEVGRDTDLANSMGLFLQKTNIIRDYLEDTQE
GRAFWPQEAWSQFASRLEDLAQPEKLESALSCLNLLVTDALRHVPDVIAYLSRLRNQSVF
NFCAIPQVMAIATLSTCYNNPMVFQGVVKIRKGQAVTLMMEATNMRAVQTIIAQYSQEIL
QKVSLTDPTRDKTLHILAVIQEKLALPQPDLGSRNHHLSPMYLSAAMLLAALSWQYLSTT
AAQAQDTGDMQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggactccgggtttgttgctcccccaagcagcgtggcctccacatggaccgtgtcgtct
cctaactgcgggctcgggctcttcccgtcggggttttttcgtatggccggagcctgctgc
aaatgtccggcctctctgtccgtgttgaagcgctccctctcggtggcgccgcgaggctgc
ggctcctctccccctcggtccgtcctgcagggctggaggaggcgcggggagaggggcctg
caggaggccaccagacccagcagcgccctcagaaccgcgggtttctaccgacagacagca
tttctttgtctctcctgccaggagtctatgagcgacagcctgcggacctgctacgtatac
ctgaatcagaccagcaggagctttgcggccgtgattcaggcactggacggagagctgaga
catgcggtttgcatcttctacctggtgcttcgtgcactggacacagttgaggatgacatg
accatccctttggagaagaaggtgcccatgcttaacaatttccacacgtacctgtaccag
gaggagtggtgcttcactgagagccaggagaaggaccgtcaagttctggaggatttccct
acgatatcactggaatttagaaaccttgctcaggaatacagagacgtcatatctgatatc
tgccaccggatgggagtcgggatggctgaatttctggagaagaaggtgggatccatgaaa
gagtgggacctgtactgccactacgttgccggtctcgtcggcatcggtctgtcgcggctc
ttctctgcctcccagctggaggatccagaagtgggacgggacacggatctggcaaactca
atgggcctgttcctgcagaaaacaaacatcatccgagactatctggaagacactcaggag
ggacgggccttctggccacaagaggcgtggagccagtttgcgagtcgtctggaggatcta
gcccagcccgagaagctggagtcggctctgtcctgcctcaacctgctggtcactgacgct
ctgcgtcacgtccccgacgtcatcgcctacctgtctcggctgcgcaaccaaagcgtcttc
aatttctgcgccattccacaagtgatggcaatagctaccctctctacgtgctacaacaac
ccgatggtgtttcagggtgtggtgaagatcagaaagggacaggctgtcaccctcatgatg
gaagccaccaacatgagagcagtgcagaccatcatcgcccagtacagccaagagatttta
cagaaggtctccctcaccgatccgacgcgggacaagacgctgcacatcctggctgtgatc
caggagaagttggcccttcctcaacccgacctcggctccaggaaccaccacttgtctcct
atgtacctgtcggctgccatgctgctggccgcgctgagctggcagtatctcagtacgaca
gctgcccaggcacaggacacgggggacatgcagtga
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