Poeciliopsis prolifica (blackstripe livebearer): 129351495
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Entry
129351495 CDS
T09758
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04510
Focal adhesion
pprl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129351495
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129351495
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
129351495
NCBI-ProteinID:
XP_054876327
LinkDB
All DBs
Position
Unknown
AA seq
1776 aa
AA seq
DB search
MRAFIFCLTALALWSPVRAQEPEFADVCTEGSCYPATGDLLIGRAHRLTASSTCGLQEPQ
RFCIVGHLEEEKKCFICDSREMYDEDNNPISHTIENVVTTFAPNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMMIERSMDFGETWQVYRYFAQNCESVFPGISTGPM
RRVDEIICDTRYSDFEPSTEGEVIFRVLDPAFEIDDPYSLRIQNMLKITNLRIKFIKLHT
LGDNLVDIREEVTEKYYYALFDMVVRGNCFCYGHASECAPIDREQDRPEGMVHGRCVCNH
NTEGLNCERCQAFYQDLPWRPAEGRNTHACKRCECNRHSASCHFDLAVYISTGNVSGGVC
DDCQHNTVGRQCEQCAPFFYQHPNRDLRDPNICEPCNCDPEGSLQGGLCDPRTDVAAGLI
SGQCRCKLYVEGERCDHCRQGHYGLGQGPEGCLPCSCNNLGTMPGGNPCDSDTGRCFCRR
LVTGHNCDECLPEHWGLSNDMDGCRPCDCDQGGAINNNCDSQSGQCVCRAHMFGRRCDQV
ESGFYFISLDHYTYEAEEAQHGPGVKSVARAHPQDRRPTWTGMGFAHVPEGGYIEFNVNN
IPQSMDYDILVRYEPQLPQQWEQVTVRVERPVFNPPSYTAHCSTSAQSGDEQFISLPPGS
RHVLLVSPVCLEKGLNYTIRLTFPLYSSDSHIQNPHTLIDSLVLMPRVREMEMFHGTEGE
EAWDTFQRYRCLERSRSVIKSPMTDICIDYIFSISALLHKEAMTCHCDPQGSISAVCDPS
GGQCRCRPNVVGRNCDHCAPATFLFSPAGCRSCDCDPLGSVTPFCHESTGQCECVQGATG
RQCSHCLPGYWGFPQCRPCQCNGHSDYCHPQTGECQGCRDFTAGHHCERCMNGYHGDPEL
GSGSHCRPCMCPDGPRSGRQFADSCYVQSNQLVCVCSHGYKGTRCDECAPGHYGNPLIPG
GRCTPCDCNNNIDMHDPGSCDIRTGACLKCLYHTQGHSCQQCKPGYYGDAATQSCRKCMC
SSSGTTSYACPSPDNCRCDQRSGQCSCLPNVVGQNCDRCAPNTWNLASGTGCQRCDCDPN
HSVGSSCDVVTGQCVCKPGFSGRTCRECKELFWGNPEVKCHACDCEPRGISSGQCHRVTG
QCACLEGFSGHRCDHCARGYKGDFPICEPCHQCFSVWDTVVGELTNQTRRLEAQVTELLT
TGVTAPYKELISSLERNAKAVRDIVLNKTASEKLDNIQDLIHQITGVVSFLNGNLNTTQE
ELNQVNDAANTTETNLDVLTQEANKLEQHVQMLRQQVHNIKNANIHGAMNTISAAHMESQ
DAELRSNAATGDPGNTLEQSAALRKATEGKLSSSQKEFDRKHQRNMQKLDKLSKEVDKFD
LSPLSEKMCGGSGEGESCSTCGGFGCVREDGAPHCGGEGCTGFVTMAQTALKSSQKLDQE
IQQAMEEVDKLSRMVWEANIRANEAKAKAMDVLISSNRSKERVEQSNKQLCDLIKEIRDL
LTNEKADASVIEAVANEVLALQMPTSAEKLQELTNEIREKVGTLTSVEEILRQSAKDIRS
AESLLTRAKSASEKASNVTEMAHTVKAALDKTERAQSIAMDAIQLANNNTKETTDLINSV
ESETAQSELKLSETTGRLLQLEHEVGLLRQNNLEMNQKVETAERVSERAKAIAEEAQKEF
DEDLKDKLEVVEDYMEDKGESVLQAKSIADELKQKARELITQSNNKLQRLTELEISYEAN
QRVLEEKAEELAELERTARLILDEISQKVSLYSSCQ
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgagggccttcatattctgtctaacagctttagcgctgtggagtcctgtcagggcacag
gagccggagtttgcagatgtgtgcacggagggcagctgctaccccgccacaggggacctg
ctgatcggcagagcgcacagactcaccgcctcctccacctgcggcctccaggagccccag
cgcttctgcattgtcggacacctggaagaggaaaagaaatgtttcatatgtgactccaga
gagatgtacgatgaggacaacaaccccatcagccacacgattgagaatgtggtcaccacc
ttcgcccccaaccgtctcaagacctggtggcagtctgagaatggtgtggagaatgtaact
atccagctggacctggaggccgagtttcatttcacacatctcatcatgaccttcaagacg
tttcgtcctgctgccatgatgattgaacggtccatggattttggagaaacatggcaggtt
tatcgatacttcgcccaaaactgcgagtctgtctttcccggcatttccactggaccgatg
cgtagagtggacgaaatcatctgtgacacccgctactcagactttgaaccatccacagag
ggagaggtgatatttcgggtgctggatcctgcttttgagattgatgacccctacagcttg
aggatccagaacatgctgaagatcacaaacctcagaataaagttcatcaagctccacact
ctgggtgacaacctggtggatatcagagaggaagtgacggagaagtactactacgcactc
ttcgacatggtggtccgagggaactgcttctgctacggccacgcctccgagtgcgcgccc
atagacagagaacaggacagacctgaaggcatggttcatggccgctgcgtttgcaaccat
aatactgaggggctgaattgtgagcgctgccaggcgttttaccaggacctgccttggaga
cctgcagagggccgaaacacccacgcctgcaaaagatgcgagtgcaatcggcattccgcg
tcgtgtcacttcgacctcgccgtgtacatttcaaccggtaacgtcagcggaggagtgtgt
gacgactgccagcacaacacagtggggcggcagtgcgagcagtgtgcgcctttcttctac
cagcaccccaacagagacctgagagaccctaacatctgtgaaccgtgtaactgtgacccg
gagggatctctgcagggcggactgtgtgacccgcggaccgatgtggcggccggcctgatc
tcgggtcagtgccggtgtaaactctatgtggagggagagcgctgtgaccactgcagacag
ggacactacgggctgggacaggggccagaagggtgcctgccttgttcctgcaacaatctg
ggaacaatgccaggaggaaacccctgcgattcagacacaggacggtgcttctgcaggcga
cttgtcaccggtcacaactgtgatgagtgcctgccagagcactggggtttgtcgaatgac
atggacggttgtagaccgtgtgactgcgaccagggaggcgcaatcaacaacaactgtgac
tctcagtcagggcagtgtgtttgccgggcgcacatgttcggacgccgctgcgatcaggtc
gagtccggattctacttcatctctttggatcactacacttatgaagctgaagaggctcaa
cacggccctggggtcaaatccgttgcgagggcccatcctcaggaccgaaggcccacatgg
actgggatgggctttgctcatgttcctgaaggcgggtacatagagttcaatgtcaacaac
atcccacagtcaatggactacgatatacttgttcgctacgagccgcagctgccgcagcag
tgggagcaggtgactgttcgggtcgagcgccccgtcttcaacccaccgagctacaccgct
cactgcagcacctccgcccaaagtggagatgagcagttcatctctctcccacctggatcc
aggcacgtgttgctcgtgagtccggtgtgtttggagaaaggactgaactacaccatccgt
ctgactttcccgctgtactcttcagacagccacatccagaatccacacacgctcatcgac
tctctggtgttgatgccccgggtcagagagatggaaatgtttcatgggacggagggtgag
gaagcgtgggacacgtttcagcgctacagatgtttggaaagaagccgtagcgtcatcaaa
agcccgatgacggacatctgcattgactacatcttcagcatctctgctctgctgcacaaa
gaagcaatgacttgccactgtgaccctcagggttccatcagcgccgtgtgcgaccccagc
ggcggtcagtgtcgatgtcgacccaacgtggtcggcagaaactgtgaccactgcgctccg
gccacgttcctgttcagtcctgctggctgcagatcttgtgactgcgacccgctgggctcc
gtcactcctttctgtcacgaatcaactggtcagtgtgagtgcgtacagggagctacggga
cgccagtgttcccactgcttgccggggtattgggggttcccccagtgcagaccgtgccag
tgcaacggccacagcgattactgtcaccctcagaccggagagtgtcaggggtgcagagac
tttaccgccggacatcactgtgagagatgcatgaatggttaccatggtgacccagagctg
ggatcagggagccactgtcgcccctgcatgtgtccggacggaccccgcagtggtcggcag
tttgcggacagctgttacgttcaaagtaatcagctggtgtgtgtgtgcagccacggctac
aaaggaaccaggtgtgatgagtgcgccccgggtcattatgggaaccctctcattcccggt
ggccgctgcacgccctgcgactgcaacaacaacattgacatgcatgacccaggatcctgc
gacatccgcacaggtgcctgtctcaaatgtctgtaccacacgcagggccactcatgccag
caatgcaaaccgggatattacggcgacgccgccacacagagctgccggaagtgcatgtgc
agctcatcggggacgacatcttacgcctgtccatcccctgacaactgccgctgtgaccag
cgaagcggccagtgctcctgcctgcccaacgtggttgggcagaactgtgaccgctgcgct
cccaatacgtggaacctcgccagcggaacaggctgccaacgctgcgactgcgaccccaac
cactctgtcgggtcttcctgtgatgtggttacgggtcagtgtgtgtgcaaaccgggtttc
agtggcaggacgtgtcgagaatgcaaagagctgttctggggaaatccagaggtcaaatgt
cacgcttgcgactgtgaaccacggggaatctctagtggtcagtgtcatcgagtcacaggg
caatgtgcctgcttagaaggcttctccggccaccgctgtgaccactgcgccaggggctac
aagggggacttccccatctgcgaaccctgccaccagtgcttctccgtctgggacaccgtc
gtaggcgaactgaccaatcagactcgtcgtctggaggcccaagttaccgaactgctaacc
actggagtgacggcgccatacaaggagctgatcagcagtctggagagaaacgccaaggcc
gtcagggacatcgtgctaaacaagaccgcttcagagaagctggataacatccaagacctt
atacatcagatcactggagtggtgtcgttcctcaacgggaatctgaacacaacgcaggaa
gagctgaatcaagttaacgatgcagcaaacacaactgaaacaaacttggatgtactgacc
caggaggccaacaagctggagcaacacgtccaaatgctcagacagcaggtccacaacatc
aagaacgccaacatccatggagccatgaacacaatttctgctgcacacatggagtcccaa
gatgcagagcttcgctccaatgccgcaacaggagatcctggcaacactctggagcagtca
gctgcattacggaaagccactgagggcaaactgagcagtagtcagaaggagtttgaccgg
aaacaccaaagaaacatgcagaagcttgacaagctgtccaaagaagtggacaagtttgac
ttgtccccgcttagtgagaagatgtgtggcggttcaggtgaaggggagagctgctccacc
tgcggcggatttgggtgtgtcagggaggacggagcgccccactgtggaggggagggatgc
accggttttgtcacaatggctcaaactgctctgaaatcctcccagaagctggaccaggag
atccagcaggccatggaggaggtggacaagctctccaggatggtttgggaagcaaacatc
cgcgcaaatgaggccaaagcgaaggcgatggatgtgctgatctcatccaatcggagcaaa
gagagagtagagcagagcaacaagcaactctgtgacctcatcaaagagatccgtgacctt
ttgacgaatgagaaggcagatgcttctgtgattgaggcggtggccaatgaggtgctggct
ctgcagatgccgacatcggcggagaagctgcaggagttgaccaatgagatcagggagaag
gtcggcactctgaccagcgtggaggagatcctccgtcagagcgccaaggacatccgaagt
gcagaatctctcctgactcgggccaaatcagcaagtgagaaggcatcaaatgtgacagag
atggcgcacacagtgaaggcggcgttggataagactgagcgtgctcagagcatcgccatg
gatgccattcagctggccaataacaacacaaaagaaaccacagacctgatcaactctgtc
gaatcagagacggcacaatcggagctgaagctcagtgagaccaccggtcgtctgttgcag
ctggagcatgaggtgggcctgctgaggcagaacaacctggagatgaaccagaaggtggaa
acagctgagcgggtctccgaacgggccaaagcgatcgcagaagaggctcaaaaggagttt
gatgaggatctgaaggataaactggaggtggtggaagactatatggaggacaaaggggag
tcagtgctgcaggcgaagagcatagcagacgagctgaagcaaaaggccagagaactgatc
acacagagcaataacaagctgcagagactcacagagctggagatctcctacgaagccaac
cagcgggttctggaggagaaagcagaagagctggccgagctggagcgaacagcccgcctc
atcctggatgagatcagccaaaaagtgtcgctttacagcagctgtcagtga
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integrated database retrieval system
