Poeciliopsis prolifica (blackstripe livebearer): 129351565
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Entry
129351565 CDS
T09758
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04010
MAPK signaling pathway
pprl04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129351565 (cacna1ba)
04020 Calcium signaling pathway
129351565 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129351565 (cacna1ba)
Ion channels [BR:
pprl04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129351565 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
129351565
NCBI-ProteinID:
XP_054876452
LinkDB
All DBs
Position
Unknown
AA seq
2291 aa
AA seq
DB search
MARFEDDASSRFRGGGLTGPSRGANRQPYKQTMAQRARTMAIYNPIPVKQNCLTVNRSLF
IFSEDNIIRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPALDKTPLSERLDDTEPY
FIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGADFDLRTLRAVRV
LRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGLDFYIGKFHRTCFKN
GTKEQVADFPCGPEPPARTCGKDNICEEYWLGPNFGITNFDNILFAILTVFQCITMEGWV
DILYNANDASGNMWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLRR
QQQIERELTGYLEWICKAEEVMLAEEDKNAEEKSLDGAWYKRKHNPNSVLKRPKKHKNDL
INAEEGEDHFTDISSVGSPFARASAKSKNESSSYLRRKEKRIRFTIRHLVKSQTFYWTVL
CLVGLNTLCVAIVHYEQPEWLTYALYLAEFVFLGLFLAEMTMKMYGLGPQSYFHSSFNCF
DFGVIIGSIFEVVWAAIKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSI
ISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQILTGEDWNAVM
YHGIESQGGVHGGMFSSIYFIILTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQEEAI
SKKLALQKAKEVQEVSPMLAANISITTSYVCTPVHHYLSNEQQRSVKTMSVWEQKASQLR
RQNQASCEVLYDPEECVHLPSGLQMRPDMKTHLDRPLVVGHSDGLLMRGHQHHHHKPGTP
EEAESAADPPSAPPHFQHRHHRHRDRARGKMQEEPNDSGGDSGKDGRQHIHHSHSKNHDC
RQEGKSGKDRSRKHHHHSSLDESAGGGATRERDHRHHHSHRQSRGGNGTVNGGGRGERRL
HHKDGRSSNKDGDRESKRRRHHTHGSRSRSRAEGEESNKREEPNTNRFGDSDDISQQPGS
LETSGQPEDSDNQKNVRRIGQSSIHIPPVTITTPGEITMIQMNSTDNESMPMNEKNLKDQ
CHSGPRPILPYSSMFIFGQTNPVRRLCHYIVTLRYFEMSILVVIAMSSIALAAEDPVWTN
APRNNVLKYLDYAFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAF
SGTKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIF
AVIAVQLFKGKFFYCTDESKALEKDCKGQFLDYDKETVAAMPREWKKYEFHYDNVLWAFL
TLFTVSTGEGWPTVLKHSVDATFEDQGPSPGYRIEMSIFYVVYFVVFPFFFVNIFVALII
ITFQEQGDKALSECSLEKNERACIDFAINAKPLTRYMPEDTQSFQYRMWKFVVSAPFEYS
IMIMIALNTVVLMMKFYGAPDFYEAMLKYLNIVFTTLFSLECILKIIAFGPLSYLKDAWN
VFDFVTVLGSITDILVTEIKDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKA
LPYVCLLIAMLFFIYAIIGMQVFGNIELNEDTAINHHNNFRTFLQALMLLFRSATGEAWH
EIMLSCLSHRPCDELSGTSGKDCGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTR
DSSILGPHHLDEFIRVWAEYDPAACGRIKYSDMYQMLLHMPPPLGLGKKCPPRVAYKRLV
KMNMPIADDNTVHFTSTLMGLIRTALEIKLASGMVLQRLMDAELKKEMSTVWPSLSQKTM
DLLVTPHKPNELTVGKVYAALMIFDYLKQNRARRLQQMANSDPQCKVEALFKPLLPLTHM
QGSHSAPQSQQSQESFHQVVSSNSINNGGMLPGYDPRNKSVPSTGMERPTEGVYPRPKKT
ISKGPSVDTSNAVNQESVGLNSVSSTVPVPLPGPGLESQGRAASMPRLNVELQSGRDASS
MRRSVTTVDPQRPQEVNLRDYTLEKPRQERTHHHHHHHHCHHRRDRDKDKRQGSLDTPLG
GQPPNSAEEPASEPAASREQAHKRGRSHERKHHHSSTDKQRYYSCDRYCSRERCCLKSAT
AACSYREEQETSKKQGSGLVKGSQDVSRSGSSTPSRGRRQLPQVPHTLRPGVGYKTAYPS
QVHFVSSQASQSPGRLSRGLSEHNTFRHSSSYYFPCPVTRISSEPFLGQGHGEALRSPYS
SFQNQLDVFQDEASLSPTPSAEQSPRTTLPRRMGALHPTFGVDPSVPNGYHLSLGGRTSP
GTRYRALWYRR
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atggctcgttttgaagacgatgcttccagccggttcagaggcggcggcctcacggggcca
agcagaggggccaataggcagccgtacaaacagaccatggctcagagagccagaaccatg
gctatttacaaccccattccagtcaaacagaactgcctcaccgtcaaccgctccctgttt
atctttagcgaggataatattatccggaaatacgccaaaaagatcacagaatggcctccg
tttgaatacatgatcctggccaccatcatagcaaactgcatcgttctggccttggagcaa
cacctgccagctttggacaaaaccccgctgtcagaacgtttggatgacacagagccctac
tttattggaatattttgctttgaggcaggcatcaagattattgctttgggttttgctttt
cacaaaggctcctacctacgtaatggctggaatgtaatggactttgtggtggtcctaaca
gggatcctggccactgtaggggctgattttgatctgagaacactgagagcagtcagagtc
ctgcggcccctcaaactcgtctctggaattccaagccttcaagtggtgttgaagtccatt
atgaaagctatggtaccactgctccagattggaatgctgcttttcttcgccattctcatg
tttgctattattgggctggacttctatattggcaaatttcatcgaacatgcttcaagaat
ggaacaaaagagcaggtggcagatttcccttgtggacctgaacccccagcaaggacttgt
ggcaaagacaatatttgtgaagagtactggcttggacctaactttgggatcacaaacttt
gacaacatcctctttgccattctcactgttttccagtgtatcaccatggaaggatgggtg
gacatcctgtacaacgccaatgatgcctctgggaacatgtggaactggctctacttcatc
cctctcatcatcattgggtcgttcttcatgctcaacctggtgctgggcgtgctgtcagga
gagtttgcaaaggaaagggagcgtgtggagaagaggcaagaattcctgaagcttcgtcga
cagcaacaaattgaaagagagctgactggttatttggaatggatctgtaaagcagaagag
gtgatgctggctgaggaagacaagaacgctgaggagaagtctctggatggagcgtggtac
aaaaggaaacataaccccaactctgtgctgaaaagaccaaagaagcataagaatgacctg
atcaatgcagaagaaggggaggaccatttcactgacatttcatcagttgggtcaccattt
gcacgagcgagtgcgaagagcaagaatgagagctcgtcttacttgaggaggaaggagaag
agaattcgcttcactatccgccacctggtcaaatcccagacattttattggactgtatta
tgtcttgttggcctcaacactctgtgtgtagctatagtacactatgagcagccagagtgg
cttacgtatgcattatacctggccgagtttgtgtttctgggcttgttcctggctgagatg
accatgaaaatgtatggccttggaccccagagctacttccactcttcttttaactgtttt
gattttggggtcattattgggagtatttttgaggtggtctgggctgcgatcaaacctggt
gcttcatttggtatcagtgtcctgagagcactgcgacttctccggatcttcaaagttacc
aagtactggaactctttgaggaacctggtggtatccctactcaactctatgaagtccatc
atcagtctgttgttcctgctcttcctcttcatcgtggtctttgctctgctgggaatgcag
ttgtttggtggacagtttaactttgaggatgaaactccgacaaccaactttgacacattc
ccagctgctattctcactgtgtttcagattctaactggggaggactggaatgctgtcatg
taccatgggatagagtctcagggtggtgtgcatggagggatgttctcctccatttatttc
atcattctcactctttttggaaactacacactgctcaacgtattcttggccattgctgtt
gataaccttgcaaatgcccaggagcttacaaaggatgaagaggagcaggaggaggccatc
agcaaaaagctggctcttcagaaggctaaagaggtacaggaagtcagccctatgttggct
gctaacatttcaatcacaacgagttatgtctgcaccccagtccatcactacctgagcaat
gagcagcagaggtcagtcaagacgatgtctgtctgggagcagaaagccagccagctgagg
aggcaaaatcaggcgagctgtgaggtcttatatgatccagaggagtgtgtccaccttccc
tctggccttcagatgcggcctgacatgaagacccaccttgaccggcccctggttgttggg
cattccgatgggctgttgatgagaggccatcaacatcaccatcacaagccgggcacgccg
gaggaagcagagagtgctgctgatccaccatccgctccgcctcattttcaacaccgtcac
caccgccacagagacagagcgcggggaaagatgcaagaagagcccaatgacagcggtggt
gacagtgggaaagacgggaggcaacacatccatcacagccactccaaaaaccatgactgt
agacaagaagggaagagcgggaaagacaggagtagaaagcatcaccatcacagttcattg
gatgagagcgcaggtgggggggccacaagggagagagaccatcggcatcatcattcacat
cgacagtccagaggggggaatgggacagtgaatggtgggggtcgaggtgagcgcaggctt
caccataaagatggtcgatcatctaacaaggatggggatagggagagcaagaggaggagg
catcacacacacgggtcgaggagtcggtccagggctgaaggagaggagtcaaacaagaga
gaagagccaaatactaacaggtttggtgactcagatgacatttcccagcagccaggctct
ctggaaacgtctggccagccagaggactcagacaaccagaagaatgtcagaagaataggc
cagagctccatccacattccccctgtgactatcaccacacctggagagatcactatgata
caaatgaacagtactgacaatgaatcaatgcctatgaatgagaaaaacctgaaggatcaa
tgccactctggaccaagacccatcttaccttacagctcaatgtttatctttggacagacc
aacccggtgaggcggttatgtcactacattgtgaccctgaggtattttgagatgtccatc
ctggttgttatcgcaatgagcagcattgcactggcagctgaggatccagtctggacaaat
gcgcctcgcaacaatgtgctcaaatatctggactatgcctttactggtgttttcacgttc
gaaatggtgatcaaaatggtggatcttggactgcttctccatcctggatcttactttaga
gacctgtggaacattctggacttcatagtggtcagtggggctctggtggcatttgcattt
tcggggactaaaggcaaagacatcagcaccattaagtcactgagggttctcagggttctc
aggcctctcaagaccatcaaacgtctaccaaaactcaaggccgtgtttgactgtgtggtc
aactctttgaagaacgtactgaacatcctcattgtttacatcctcttcatgttcattttt
gctgttattgcggttcagctcttcaagggaaaattcttctattgcactgatgagtccaaa
gccctggagaaagattgcaaaggacagtttcttgattacgacaaagaaacagtggcagca
atgccaagagagtggaaaaaatatgaattccattatgacaatgtcctctgggccttcctc
actctcttcacagtctcaaccggggaaggctggccaactgttctgaaacattctgttgat
gctacctttgaagatcaaggtcctagccctggctaccgcatagagatgtccatcttctat
gtggtctactttgtggtctttccatttttctttgtcaacatctttgttgctctgataatt
atcaccttccaagaacagggagacaaggccttgtccgagtgcagtttggaaaagaatgag
agggcttgtattgactttgccataaatgcgaaacctttgacacgctacatgccagaggac
acacagtcctttcagtacaggatgtggaagtttgttgtttcagctccatttgaatactcc
attatgatcatgattgctctcaacactgtggtactcatgatgaagttttatggagcacca
gacttttatgaagcgatgctgaagtacctcaacatagtgttcaccactcttttctctctg
gagtgcattctcaagatcatcgcctttggtcccctgagctacttaaaagatgcctggaat
gtatttgactttgtgacagtcttgggaagcatcactgacatcctggtgactgaaatcaaa
gatagactattgaacctaagctttctgaggctcttcagagcagctcggctcatcaagttg
ctgaggcagggctacaccatccgcatcctgctctggacttttgtgcagtctttcaaggcc
ctgccatatgtgtgcctgcttattgcaatgctgttcttcatttatgccattattggaatg
caggtgtttgggaacattgagctgaacgaagacacagctatcaaccaccataacaatttc
cgcacttttctccaggctcttatgctgctgttcaggagtgcaactggagaagcctggcat
gaaatcatgttgtcgtgcctaagtcatcgaccctgtgatgagctctcagggactagtggg
aaagactgtggcagtgattttgcctacttctactttgtctccttcatcttcctctgctcc
ttcctgatgctgaatctctttgtggctgtcataatggataactttgagtacctcaccaga
gactcctccatcctggggcctcatcatcttgatgaatttattcgagtttgggccgagtat
gacccagctgcttgtggccgtatcaagtactccgatatgtatcagatgctgctacacatg
cccccgcccttaggtttgggaaagaaatgtccaccaagagtcgcctataagcgtcttgtc
aaaatgaacatgcccatcgctgatgacaacacagttcactttacctccacattgatgggc
ctgattcgcactgcgctggagataaagttggcctcaggtatggtgctgcagcgattaatg
gatgctgagttaaagaaagaaatgtccacagtttggccgagcctctctcagaagaccatg
gatttgttggtgacgccacacaaacccaatgagctaacggtaggaaaggtttacgcagcg
ctgatgatctttgactacttaaaacagaatcgagcaaggaggctgcagcagatggccaac
tctgacccccagtgcaaggtcgaagctctgtttaagccattgctgcctctgactcacatg
cagggctcacacagtgctcctcaatctcagcaaagccaggagtcattccatcaagtggtc
agctctaactccatcaacaatggagggatgctgccaggttatgaccccagaaataaatca
gtcccttccactgggatggagaggcccaccgagggggtctatcccagaccaaagaaaacc
atatccaaaggcccatcagtggacacatcaaacgctgtcaatcaggagtcagtagggctg
aacagtgtcagcagcacagtcccagtcccactccctggtccaggcctggagagccagggc
agggctgcttcaatgcctcgcctcaacgtggagctccagtctggtcgtgatgccagctct
atgagacgctctgttaccactgtggatccacagcggccccaagaggttaaccttagagac
tacaccttggagaaacctcgtcaggagagaacacatcaccatcaccaccaccatcactgc
caccaccgcagagaccgggacaaagacaagagacaagggtctttggatactcctcttggg
ggccaacctcccaactcagctgaagaaccggcatctgaacctgctgcctccagagagcaa
gcccataaacgtgggcgctcccatgaaaggaaacatcatcactcctcaacagacaagcaa
cggtactactcctgtgaccgctactgcagccgggaacgctgctgtctcaaatctgctact
gccgcctgctcctaccgagaggagcaggaaaccagcaaaaagcagggcagtggtttggtt
aaaggcagccaagatgtatcaagatccggttctagcacaccaagccgtggacgccggcag
ctcccacaggtcccacacaccttacggcctggggtgggatataagactgcatacccttct
caagtgcactttgtgtctagtcaggcttctcagagtcctggccgactaagccgcggcctg
tcggaacacaacaccttccgtcatagtagttcctactacttcccctgccctgtcactcgt
atcagctcagagccctttctgggccagggccatggtgaggccctgcgcagtccttacagc
agcttccagaaccagctggatgtcttccaggatgaggcatcactgtcccctacccctagt
gctgaacagtcaccccggaccacactgcctcgaaggatgggagccctacatccaactttt
ggtgtagacccaagtgtgcccaatgggtaccacttaagtttagggggcaggaccagccca
ggcactagatacagggcactgtggtacagaaggtag
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integrated database retrieval system
