Poeciliopsis prolifica (blackstripe livebearer): 129351590
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Entry
129351590 CDS
T09758
Symbol
whrnb
Name
(RefSeq) whirlin
KO
K21879
whirlin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprl03037
]
129351590 (whrnb)
Cilium and associated proteins [BR:
pprl03037
]
Primary cilia and associated proteins
USH complex and associated proteins
129351590 (whrnb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
USH1C_N
HHD_RTEL1
CCM2_C
Motif
Other DBs
NCBI-GeneID:
129351590
NCBI-ProteinID:
XP_054876486
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MSADLERASPNTSVNSAGVGSRALSTNVRRLHNTLNVLLSDLERKQFIHCLNVYHAKRNV
YDLVQTLKVILDTPAKRQLLPMLRLVIPRSDQLLFDQYTSEGLYLKTDLLPSNGSAESFG
EEGDSTLQSYISSVCEQPLTTTCPEPTVSMAPLFSEGLSGEVRQVTLTRSRSQEGLGFSI
RGGSEHGVGIYVSLVEPGSSAEREGLRVGDQIVVANDSVFDSVSHTEAVKVLKGCKKLTM
LVCSMGCIPGGYMTNQVYSWLDPQGRSVSPPPDSQEADLRQGHSMEERTVNLNMDNGRSL
GLMIRGGAEYGLGIYITGVDPGSAAHVGELKVGDQILEVNGQSFVTISHDEAVNILKSGH
HLMMRLRDVGRLPHARTVVDETKWTCGHVIAETNATAGLNSVSHPSVGAVVHTSISASGN
NTRPSSARATPVFGKLAGYRGVSPPGAQVSLEQQANLLLTEQERQTMAYYLREYQQGHIN
VEPLTMALSELFNTHAKLSLLSEVRSLVAAEDLEVYDRLVLHHQREAHQAWEGLRMLHPS
GHCSHAVLVIHDAGQISRPVAEASTGNWIEKEQEKNRNAFRNISLDEARSSPPPFRTAPV
QAQITQARDKEISQRPSARLLQPSSSVPLPGPTRLLQESFHKSPKSFPTSQQPFSISAKH
ICAATKHHTSLSTLQHTCQSTPHLSGPEQYSHSHFTQHAGHFNRLTSGHQTCPGFLNHRD
SSIFVQPEAAVKLSSRSSSYEKSSAFSKSASSSKEASPMPSPHPSPRPSPCPSPCPSHMI
PASLSCSPDRPCSPALTHKIIITDMNRLSADSRQQQRGALSQLSDSGQTLSEDSGVDIGE
TGGLTKDGSPRPTKNKQGHLEIQGAHISPIGATRQQISSPLSALNTAIVRVVKNSNTLGI
AIEGGANTRQPLPRIVTIQKGGSAHNCGQLKVGQVILEVNGVSLRGQEHEEAARIIAEAF
KTKEKDHIDLLVADLGF
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgacctggagcgcgcttcgcccaacacatcagtgaactcggccggcgtcggg
agccgtgcgctctcgacaaatgtccgaaggctccataacacactcaatgtgctgctaagt
gacctggagagaaagcaatttatccactgtctaaatgtttaccacgctaaacgcaacgtt
tacgacctggtccagactctcaaagtgattctggacacgcccgcgaagcgacagctgctg
cccatgctgcgtctggttatccccaggtccgaccagctcctctttgaccagtacacgtcc
gaggggctctacctgaaaacagacctgctgcccagcaacggtagcgcggaaagcttcgga
gaagagggcgattccactctgcagtcgtacatcagctcagtctgcgagcagcctctcacg
acgacttgtccggaaccgactgtttccatggccccgctcttcagcgagggcctctccgga
gaagtgcgtcaagttaccctgacgcgctccaggagccaagagggtctaggttttagcatc
cgcggggggtcagagcacggcgtggggatctacgtgtcgctggtggagccgggctcatcg
gccgagagggaaggactgagggtcggggaccagatagtagtagcgaacgactcggtgttt
gactctgtttctcacacagaggcggtgaaggtgttgaagggatgtaagaagctgaccatg
ttagtgtgctcaatgggttgcatcccaggaggctacatgaccaaccaagtgtacagctgg
ctggaccctcagggccggagtgtatctccaccacctgatagccaggaggccgacctgagg
caaggacacagcatggaggagaggacggtcaacctgaatatggacaacggtcgctctctg
ggtctgatgataaggggtggggctgagtacggactggggatctacatcacaggagtggac
cctggatctgctgctcatgttggtgaactcaaggtgggtgaccaaattctggaggtgaat
ggtcagagctttgtcactatctcccatgatgaagcagtaaacatcctcaagtcagggcat
cacctaatgatgaggttgagggatgtgggccgtttgcctcatgcacgtacagttgtggat
gagaccaaatggacctgtggtcatgtcatcgctgagaccaatgcaacagctggcctaaat
tctgtctcacatccaagtgtcggtgctgttgttcatacaagcatcagtgccagtggcaac
aatacaagaccatcatctgccagagccacacctgtgtttggaaagttggcagggtacaga
ggggttagcccacctggtgctcaagtgtctctggagcaacaagccaacttgctgctgaca
gaacaggagaggcagaccatggcctactacctgcgggagtatcagcaaggacacatcaat
gtggagccattgaccatggctctttcggagcttttcaacacccatgcaaagttgtccttg
ttgtctgaggtcaggagtctagtggctgctgaggatctggaggtgtatgacaggctggtg
ttgcaccatcaaagggaggctcatcaggcctgggaaggtctcagaatgctacatccatca
ggccattgcagccatgcagttcttgtaatacatgacgcaggacagatcagccgtccagtg
gctgaagcttccactggcaactggatagaaaaagaacaagaaaagaacaggaatgccttc
cgaaacatttcactggatgaagcgaggtcttctcctccaccttttaggactgcacctgtc
caggcccagattactcaagccagagacaaagagatcagtcagcgaccctcagcccggcta
ctccagcccagttccagtgtaccccttcctggtccaactcggctgcttcaagaaagcttc
cacaagtcaccaaagtccttccctacctcccagcagcccttctcaatatctgccaagcat
atctgtgctgctacaaaacatcatacatctctcagtacactccaacatacctgccagagc
acccctcacctctctggcccagagcaatactcccattcacacttcactcagcatgctggc
cacttcaaccggctcacttcaggacaccaaacatgtccgggcttcctgaaccatcgggac
tcctccatatttgttcaaccagaggcagcagtcaaactttcttctcggtcaagctcatat
gaaaagtcatctgctttttcaaagtctgcctcctcctctaaagaagcatctccaatgcca
tcacctcatccatcaccacgtccttcgccgtgtccttccccatgtccctctcatatgata
cctgcctctctatcatgtagtccagaccggccatgctcacctgccctcacccacaaaatc
atcattacagacatgaaccggctgtctgcagactccagacaacagcaaagaggtgcgctg
tctcagttgtcagacagtggtcagactctgagtgaagacagcggtgtagatataggagag
actggcggtcttactaaggatggcagcccaagaccaaccaagaataagcagggtcatctg
gaaattcaaggggcccacatctctcctataggggctacaagacaacagataagctcacct
ctttcagcactaaacactgccatagtcagggtggtgaaaaattccaacacgttgggcatt
gctatagagggaggagccaatacaagacaacctttgccacgcattgtgaccattcagaaa
ggaggctcagctcataactgtggccagctaaaggttggccaggtcatcctagaagtcaat
ggagtttcactaagaggacaggaacatgaagaggctgcccgaatcattgctgaagcattc
aagaccaaagagaaggaccacatcgacttactggtggctgatctagggttctaa
DBGET
integrated database retrieval system
