Poeciliopsis prolifica (blackstripe livebearer): 129351673
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Entry
129351673 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA 3' end processing protein WDR33-like
KO
K15542
polyadenylation factor subunit 2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129351673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129351673
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129351673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_WDR75_1st
eIF2A
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
129351673
NCBI-ProteinID:
XP_054876588
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MATDVGSPQRFFHMPRFQHQAPRQVFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLENRLWQRDHRDFRAIQPDAGCYNDLVPPLGMLNNPMNAVTTKFVRTSTNKVKC
PVFVIRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HSGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHXNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
AGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDVEPNSLATIPGMGIPEQLKAAMEQEQSSKEAAAEVEMSIPGLDWGMDE
VMGRDSKKVPQKKVPYAKPIPAQFQQAWAENKVPMMPPSADLSKDRNLEQKVEGKKKTQA
ELEQEMAALQYTNPHLLEQMKMSQMNSDGNMGPPQGPGSMPPFPGPGGPGPPGQQGYAPN
MPHQQMAPPMGPTGMQQPFLQPGQMGPPSGPPSHQGPPQGMMGPSDMQEPQRHPGPPRHM
GPPGPHGMGPRGMQGPPGGMMGHPPRGIGLRDPQGPPTQGNMMGPQGQMQGGMMGPPPRT
HGNMPNNYGMGNMQGPQGGMQGPPYMQHQGQNSGPMMHGMGPPGPSNKGDHRGPPPNHHM
GPTDRQGPGGPGGPDQGSYWGDGQQGRRGPQDGGQDFHSRGEDNWRPGYQGGDCGGAGTG
GRGXWGSDDRFGAGDFRGRRDDRFRGGGPGRGGRGYTEDYGGQEEGFDGGEEVGRGWESG
GRGRPPRGGGHDGFRDDGSSPGGRERPSSMQGMDMASLPPRKRPWQDGPGTGDHEAPDGG
GRPQRDDGGYGPPGRGGRGGWGPRRGGPPPRGGPRAGGRGR
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagacgtgggctcgccgcagcggttcttccacatgccgcgcttccagcaccag
gcgccgcgacaggtgttctacaagcggcccgacttcgcgcagcagcaggccatgcagcag
ctcaccttcgacgggaagcgcatgaggaaggccgtcaaccgcaagaccatcgactacaac
ccgtccgtcatcagatacctggagaaccgcctgtggcagcgcgaccaccgggacttcagg
gccatccagcccgacgccggctgctacaacgacttggttcctcctctgggaatgctcaac
aacccgatgaacgccgtcaccaccaagttcgtccggacctccaccaacaaggtcaagtgt
cccgtctttgtcatcaggtggacccctgagggccgccggctggtgaccggggcctccagt
ggagagttcaccttgtggaacggactcaccttcaactttgagaccatattacaggcccat
gacagcccggtgcgggccatgacctggtcccacaacgacatgtggatgttgacggcggac
cacagcggctacgtcaagtactggcagtccaacatgaacaacgtcaagatgttccaggct
cacaaggaggccattagagaagccagcttctctccgactgacaacaagttcgccacctgc
tccgatgacggcaccgtccggatctgggacttcctgcgctgccacgaggagcggatactt
cgaggtcacggcgccgacgtgaagtgcgtggactggcaccccaccaaggggctggtggtg
tccggcagcaaggacagccagcaacccatcaagttctgggaccccaagacgggtcagagc
ctggctacgctccacgcccacnagaacacggtgatggaggtgaagtggaacctgaacggg
aactggctgctgacggcgtcccgggatcatctctgcaaactcttcgacatccggaacctg
aaggaggagctgcaggtgttccggggccacaagaaggaggccacagcggtcgcctggcac
ccggttcatgagggtttgttcgccagcggaggttctgatgggtcgctgctattctggcac
gccggggtggagaaggaggtgggcggcatggagatggcccatgaagggatgatctggagt
ctcgcctggcaccctctgggtcacatcctgtgttctggttccaatgaccacaccagtaag
ttctggaccaggaaccgacccggggacaagatgagagaccggtacaacctgaacctgctt
cccgggatgtcggaggacggcgtggagtacgacgatgtggaacccaacagcctggccacc
attcctgggatgggcatcccggagcagctaaaggcggccatggagcaggagcagagcagt
aaagaggcggctgccgaggtggagatgtccatccctggactggactggggcatggacgag
gtgatgggtcgggactccaagaaggttcctcagaagaaggttccctacgccaaaccgatc
ccggcgcagttccagcaggcttgggcggagaacaaagttcccatgatgcccccgtctgca
gatctgtcaaaggaccggaacctggagcagaaggtggaggggaagaagaagacccaggcg
gagctggagcaggagatggcggcgctgcagtacaccaacccccacctgctggagcaaatg
aagatgagccagatgaactcggatgggaatatgggccccccccagggaccgggctccatg
cctccctttccaggccccggggggccagggcctccaggtcagcagggctacgctccaaac
atgcctcaccagcagatggcgccccccatgggccccacagggatgcagcagccctttctg
cagcctggacagatggggcctccttctggacccccatcgcatcaggggccccctcaaggc
atgatgggcccctcagacatgcaagaaccacagagacatcctggcccaccgagacacatg
ggccccccaggacctcacgggatggggcccagaggcatgcaggggccccctggtgggatg
atggggcatcctcctcgaggaattggtttaagggaccctcaagggcccccgacccaaggg
aacatgatgggtccccagggccaaatgcaggggggaatgatggggcccccacccaggaca
catggcaatatgcccaacaactatgggatgggcaacatgcaagggccccaaggaggcatg
cagggccccccgtacatgcagcaccagggccagaactcgggacccatgatgcacgggatg
gggcccccagggcccagcaacaaaggagaccatcgagggccgcccccgaaccaccacatg
ggtcccacagaccggcaggggcccggaggccccggggggccagaccaaggctcttactgg
ggagacggccagcagggccggaggggcccccaggacggaggacaggacttccacagccgg
ggggaggacaactggaggccgggataccaggggggggactgcgggggggcgggcaccggg
ggccggggcnnctggggctccgatgaccgctttggtgcaggggacttcagaggacggcgg
gacgacaggttccgagggggcggtccaggccgaggggggcggggctacacagaggactac
ggcggccaggaggagggctttgacggcggcgaggaggtcggtcgaggctgggagtccggg
ggacgagggaggcccccccgaggaggaggccacgacgggtttcgggacgacggttcgtct
cctggggggcgcgagcgtccctcgtccatgcaggggatggacatggcgtccctgccgccc
cgtaagcgtccctggcaggacggccccgggaccggggaccacgaggctccagacggaggc
ggacgacctcagagggacgacggcggctacgggcccccggggcggggcgggcggggcggc
tggggcccgaggaggggggggccgccgcccagaggggggccgagggccggggggcggggc
cggtag
DBGET
integrated database retrieval system
