Poeciliopsis prolifica (blackstripe livebearer): 129352056
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Entry
129352056 CDS
T09758
Symbol
ptchd3a
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
129352056 (ptchd3a)
Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
Other domain-containing proteins
Patched domain-containing proteins
129352056 (ptchd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
ACR_tran
Motif
Other DBs
NCBI-GeneID:
129352056
NCBI-ProteinID:
XP_054876830
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MKMGSRRTDCLSRPLSNFFEKLGSTVGSYPLYFFVIPILITAFLSGGFVFLKDREDNDLE
RQFTPKKGPSKATRAFVRENFPYNTSMFSENRLYDKGNFASLIAVSKNNNILESSDFEDI
VRLNKKILDISVDKKGLGFSQVCAKANGKCFSNIILELIDGNKTGITYPEHNHGSELVFL
GSALGGVVTDANSTIQRAQALKLYYYLTSQESEAEASKLWLREFKALLSDEMDRKNIEVS
YYTSKSKQEEIDSHTIDGFPLFLITYACAISFSVISCLRSDHVRNKMWVAVFGVLTSGLA
VISSFGLLLYIGVPFVITVANSPFLILGIGLNNMFIMVSDWQHSHVNDPVPKRMGHTYKE
AVMSITITALTDVPKFFIGVMSDFPSVQSFCLYTATSIIFCYIYTITFFGAFMALNGRRE
ASNRHWLTCMKVPSEKLVNQTEMYNICCVGGSYDKLTGAEKKQPVSNFFKDYYGPCLMKP
WVKGIVVLVYLAYLATSVFGCFHIQQGIELYDLAADDSHVTKFIIKDRKYFYDYGPSVMV
IVKGNLAYWDKDKRSQLQACIEDFKELHFIDRDVYTSWLDSYLSYGQEKHLNLDDKNVFL
SNLPPFFDLYPYFKQDVNQTGDAIHASRFFIQTVNITKASEEIEMLKILKSTVGRCQAAS
LLVYNHEFIYFDQYDVVVKSTIKNVGVITAVMFVVSLLLIPNPVCSLLVTCSIGSVTAGV
NGFMALWNITLDSISMIVFTICIGFTVDFSAHMSYAFVSSEKPRPKDKAVDALSSLGYPI
VQGALSTVLGVSVLSMSEFHTFRTFFKIFFLVMFIGMVHGLVFMPVFLSAGTCCADKDEK
QEDDLKSSKF
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgggctccagacgcacagactgcctctctcggcctctgtcaaacttttttgaa
aaacttggctccacagttggctcctatccactttatttctttgtcattcccatcttaatc
acagcgtttcttagtgggggttttgtttttctcaaagacagagaagacaatgatcttgag
cgccagtttacccccaagaaaggaccctcaaaggcaacgagggcttttgttcgggaaaac
tttccgtacaatacctccatgttttctgagaaccgcttgtacgacaaggggaactttgca
tccctcattgctgtctcaaagaacaacaatattttggaaagctccgactttgaggacatc
gtcagactaaacaagaagattctagacatttctgtggacaaaaaggggttgggattcagc
caggtgtgtgccaaagccaatggaaagtgcttctcaaacatcatcctggaactcatcgat
ggcaataaaaccggcatcacctatccagaacacaaccacgggtccgagttagtcttcctg
ggttctgctcttggtggagtggtaacagatgctaacagcaccatccagagggctcaagct
ttgaagctctactactatttaaccagccaagaaagtgaagccgaggcttcaaagttatgg
ctgagagaatttaaagctctgctgtcggatgagatggacaggaaaaacattgaagtctct
tactacacctctaaatccaagcaggaggagatcgacagccacaccatagatgggttccct
ttattcctcatcacttacgcctgcgctataagcttctctgtgatatcctgcctgagatcg
gaccatgtcaggaacaaaatgtgggtggctgtttttggtgttttaacctctgggttagca
gtcatctcctctttcggcttgctgctttacatcggagtgccgtttgtcataaccgtggcc
aactctccttttttaatacttggaattggcctgaacaacatgttcatcatggtgtccgac
tggcagcacagccatgtgaacgaccccgtaccgaagcggatgggtcacacctacaaggaa
gcggtgatgtccatcaccatcaccgccttgactgacgttcccaagttcttcattggcgtc
atgtctgacttcccgtcagtgcagtccttctgtctgtacaccgccacctccatcatattc
tgctacatctacaccatcaccttctttggtgccttcatggctttaaacggcaggcgagag
gctagcaaccggcactggctaacctgcatgaaagtcccatcagagaagttggtgaaccag
acggagatgtacaacatctgctgcgtgggaggcagctacgataagctcacaggagcggag
aaaaaacaaccagtgagtaatttctttaaggattactacggaccttgtttgatgaaacca
tgggttaaaggcatagtagtccttgtttatctggcgtatttagctacgagcgtgtttgga
tgtttccatattcagcagggaattgaactttatgatctggcagctgatgactctcatgtt
acaaaattcatcattaaagacaggaagtatttttatgattatggcccatctgttatggtc
attgtaaaagggaatttggcctactgggataaggataaaagatctcaacttcaggcatgc
atagaagactttaaagagctccacttcattgatagagacgtctacacatcctggttggac
tcttacttgtcttatggtcaagagaaacatctaaacctcgatgataagaatgtttttctc
tcaaatctgcctccattttttgatttatatccatattttaagcaagatgtgaaccagacc
ggagatgccattcatgcatcccggtttttcatccaaactgtgaatattaccaaagccagc
gaggaaattgaaatgctcaaaatcctcaaatctactgtaggtagatgccaggcagcatct
ttattggtctacaaccatgagtttatctactttgaccagtacgacgttgtggtgaagagc
accattaaaaacgtcggggttatcacggctgtgatgttcgtcgtctctctcctgctgatt
cccaacccggtctgctccttgttggtcacttgttcgatcggttcagtcactgctggggtc
aatgggttcatggctctttggaacatcactctggactccatatccatgatcgtcttcacc
atctgcattggattcaccgtggacttttctgctcacatgtcctatgcctttgtctccagt
gagaagccccgtcccaaagacaaggccgtggacgctctgtccagtctgggttaccccatc
gttcaaggtgccctgtccacagttttaggcgtatcagtgttgtccatgtctgaatttcat
accttcaggaccttcttcaagatttttttcctggtcatgtttattgggatggttcatggc
cttgtttttatgccggtattcctgtcagctggtacatgctgcgcagataaagacgaaaag
caagaggacgatttaaaatccagtaaattttga
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