Poeciliopsis prolifica (blackstripe livebearer): 129352090
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Entry
129352090 CDS
T09758
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129352090 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprl03021
]
129352090 (smarcd3b)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129352090 (smarcd3b)
Transcription machinery [BR:
pprl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129352090 (smarcd3b)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129352090 (smarcd3b)
PBAF complex
129352090 (smarcd3b)
GBAF(ncBAF) complex
129352090 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
TFIIA
Motif
Other DBs
NCBI-GeneID:
129352090
NCBI-ProteinID:
XP_054876908
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PTPVMEPSRKRPAPAQVQQQQQQQQQQQQQQQQQAVQNRARKKPVGFPGASEMPARQMDM
REPQSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQE
ALKRPMKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSF
FKSLVIELDKELYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFK
LDLRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSE
IPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQE
IASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEE
RRAAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccgtctggagcgaggatgccccaccaagga
gcccccatgggtccccctgggccaccgtatggtgggagtccagcagtgcggcccggcctg
cccaccccggtgatggagccgagtcgtaagcggcccgctccagcccaggtccagcagcag
cagcaacagcaacagcagcaacaacagcagcagcagcagcaggccgtgcagaaccgcgcc
aggaagaagccagttggatttcccggagccagcgagatgccggcgaggcagatggacatg
agagagccccaatcagatcccacccttggatcaaatgctaagagaaggaaaatggcagac
aagattcttccgcaaaggatccgggaactggtacctgaatctcaggcctacatggatcta
ctggcttttgagcgcaaactggaccaaaccattatgcgtaaacgcgtcgacatccaggaa
gctctgaagagaccgatgaagcagcaaaagcgtaaactaaggctctatatttcaaacacg
ttcaacccagctcgacctgacgctgatgactcagatggcagcattgcatcatgggagctg
agggtagagggaaagttgctggatgatccggggaagcagaagaagaagttttcttccttt
tttaagagcttggtgatcgagctggacaaagagctgtacggtccggacaaccacctggtc
gagtggcaccgcacacccaccactcaggagacagacggcttccaggtgaagagaccggga
gatgtgagcgtgcgctgcaccctgctgctgatgctggactaccagcctccccagtttaag
ctggacttgcgcctggcgcgcctgctgggcatccacactcagactcgctcctgcatcatt
caagccctctggcagtacgtgaagaccaacaagctgcaggactcgcatgacaaagagtac
atcaactgtgacaagtacttccaacagatttttgactgtcctcgcctgaagttctccgag
attcctcagcgcctcactaacctcctgctaccgcccgaccccatcgtcatcaaccatgtg
atcagcgttgacccaaacgaccagaagaagacggcctgctacgacattgacgtggaggtg
gaagatcccctcaagagccagatgagcagcttcctgctctccactgccaaccagcaggaa
atcgcctccctcgacaacaagattcatgagaccattgagtccatcaaccagctgaagatc
caacgggacttcatgctcagcttctccagagatcccaaaggctacatccaagactggctc
aagtcccaaagccgagacctcaagttgatgaccgacgtggtgggaaaccctgaggaggag
cggagggcggcattttaccacgaaccctggtcccaggaggcggtcagccgctacttctac
tgcaagatccagcagaggagacaggagctggaacaggccttagcagtccgcaacacctaa
DBGET
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