Poeciliopsis prolifica (blackstripe livebearer): 129352300
Help
Entry
129352300 CDS
T09758
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprl03016
]
129352300 (trub1)
Enzymes [BR:
pprl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
129352300 (trub1)
Transfer RNA biogenesis [BR:
pprl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
129352300 (trub1)
Prokaryotic type
129352300 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
GAIN_A
Motif
Other DBs
NCBI-GeneID:
129352300
NCBI-ProteinID:
XP_054877201
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MAGNVSGAAGPISSLSKLQSLNGLFAIYKKQGPTSADVLNKFKETLLREAGVQNPNSRKR
KKQQLKMGHGGTLDSAASGVLVVGIGNGTKMLSTMLTGSKKYVAVGELGKATDTLDATGM
VTMEKQFEHITRLDMEEKLKAFTGDIMQVPPLFSALKKDGQRLSVLLKKGHQVEAKPARP
VTVHSLTLQEFKPPLFTLDIECGGGFYVRSLVDDLGKALSSCAHVKELVRTKQGQFTLQD
HVLHEEQWTLKSVIGALQPCPEEDQRTDSPRSPNIAT
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaatgtgagcggcgcagcgggaccgataagttctctgtctaagcttcagtct
ttaaatggattgttcgccatatataagaaacaagggccgacgtctgctgacgtgttgaac
aagttcaaagagactttgctcagagaggctggagtgcagaacccaaacagcaggaagagg
aagaagcagcagctgaagatgggccacggagggaccctggacagcgctgccagcggggtc
ctggttgtcggtattgggaacgggacaaaaatgctcagcacgatgttgactggttcaaag
aaatacgtggctgtgggagaactgggaaaagcaacagatactcttgatgctactggaatg
gtgaccatggagaaacagtttgaacacataaccaggctggacatggaggagaagttaaaa
gcttttactggtgacatcatgcaggttcctccactcttctccgccctgaagaaagatggc
cagcgtctgtctgtgttgttgaagaaaggtcaccaggtggaggccaaacctgcccggccc
gtcaccgtgcacagcctgactctgcaggagttcaaacctcctctcttcactcttgatatt
gaatgcggtggagggttttatgtcagaagcctggtggacgacctggggaaagctctgtcg
tcgtgtgctcatgtgaaggagctggtcaggacgaagcagggccagttcaccctgcaggat
cacgtgttgcatgaggagcagtggacgctgaagagcgtcattggggcgctgcagccctgc
ccagaggaggaccagaggacggactctcccagatccccaaatatcgctacctag
DBGET
integrated database retrieval system
