Poeciliopsis prolifica (blackstripe livebearer): 129352448
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Entry
129352448 CDS
T09758
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129352448 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129352448 (neil1)
Enzymes [BR:
pprl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
129352448 (neil1)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129352448 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
UPF0164
Motif
Other DBs
NCBI-GeneID:
129352448
NCBI-ProteinID:
XP_054877470
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MPEGPELHLASLYVNKMCDGVVFSGPVIKSEVSKSPEVAFTCDSYRITAISRGKEVKLTL
MPMKSDDDGKRRSKSGQADQHMDVVFRFGMSGYFRFTSEEEVPKHAHLRFYTKEKPRRVL
SFVDTRRFGSWQPNGTWQPDRGPCIMFEYKSFRENVLSHLSDRAFDRPICEVLLNQKYFN
GIGNYLRAEILYRLNIPPFVCARDALEGLELEDEFENGKPVKNEITDTKTPERAKKKAMK
QEGGDVLRLCHTVPLEVIKLGGKGYDPEKMDYSAFEAWLQCYYVDGMKSVRDHNGRTMWF
KANPGPMVPKDSKSPKTRKRAKKDDHDYPGKKKVAKNVKESTTKKGVVKQETPKKQKPPH
PKEILSKKAKAEKTQEETPQSETKSSACRKKSSSVEPAAGRARRSERVTRKNSK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagggacctgaactccacttggccagcttgtatgtcaacaaaatgtgcgatgga
gtggtgtttagtggaccggttataaaatctgaagtcagcaaaagtccagaagtggccttc
acctgtgattcgtaccgcatcacagccatttccagagggaaggaagtgaagctgactttg
atgcccatgaagagtgacgatgatgggaagcggcggtcaaaaagtggacaagcagatcaa
catatggacgtagtctttcgcttcgggatgtcaggttatttccgcttcacatcagaggaa
gaagttcctaaacatgcccatctacgtttctacactaaggagaagcctcgccgagtgctg
agttttgtagacacacgaaggtttggcagctggcaacccaatggaacctggcagcctgac
agagggccctgcatcatgtttgagtacaagagtttcagggagaatgtcttgtctcatctg
agcgatcgggcttttgatcgcccaatttgtgaggtcctgctgaaccaaaagtacttcaat
ggaattgggaactatttgagagctgaaattctgtacaggttgaatatcccaccgtttgtg
tgtgcgagggacgcactggaaggccttgagttagaggatgaatttgagaacgggaagcca
gtgaaaaatgagatcacagacacaaagactccagagagggctaaaaagaaagcaatgaaa
caggagggaggggatgttctcagactttgtcatacagttcctctggaggtcatcaaatta
ggtggtaagggctacgaccctgagaagatggactactctgcctttgaggcatggctgcag
tgttattatgttgatggaatgaaatcagttcgggaccacaatgggagaacaatgtggttt
aaggcgaacccagggcccatggtacccaaagattcaaaatcacccaagacaagaaagagg
gcaaagaaagatgatcatgactatccaggcaagaaaaaggtggccaaaaatgtgaaagag
agcacaacaaagaaaggggtggtcaaacaggaaacccccaaaaaacaaaaacctccacat
ccgaaggaaatcctttcaaagaaagcaaaagctgaaaagactcaggaagaaacaccgcag
agtgaaaccaagtcaagtgcatgtagaaagaaaagcagcagtgtagaacctgctgcagga
agagcgagacgaagtgagagagtaaccagaaaaaacagcaaatga
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