Poeciliopsis prolifica (blackstripe livebearer): 129352620
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Entry
129352620 CDS
T09758
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprl03021
]
129352620 (btaf1)
Transcription machinery [BR:
pprl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
129352620 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TPR_Trm732_C
Vac14_Fab1_bd
HEAT_2
HEAT_EZ
TOR1L1_N
ARM_ECM29
Cnd1
Motif
Other DBs
NCBI-GeneID:
129352620
NCBI-ProteinID:
XP_054877672
LinkDB
All DBs
Position
Unknown
AA seq
1859 aa
AA seq
DB search
MIMAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLTYLRSPSWDT
RIAAGQAVEAIVKNIPEWNPAPKPKEESREDLSPEDSSCDRLNFYHFDISRLLRHGASLL
GSAGAEFELQEDKTGEMDPKERLARQRKLLQKKLGLDMGAAIGMDTDELFNDEDLDYSCH
PSGFKAQGFRAAAGCSSRNHVTIQAAELIDSEFRPGMSSRQKNKAKRLAKLVAKQKSRDV
DPNEKSNDSLEGEPEEKRRKTTNVVIDQPATEHKVLIGNVPDNSGLLEESHEWPLESFCE
ELCNDLFNPSWEVRHGAGTGLREILKSHGTGGGKLVGSTAEQMLRQHQEWIEDLVIRLLC
VFALDRFGDFVSDEVVAPVRETCAQTLGVALLHMSENSVAMTVDVLLKLLKEDQWEVRHG
GLLGIKYALAVRQDLISVLLPRVLPAITEGLQDLDDDVRAVAAAALIPVVEGLVQLLPNK
VPFIVNTLWDALLDLDDLTASTNSIMTLLSLLLTFPHVRQCSMEQSLTVLVPRVWPFLRH
TISSVRRAALETLFTLLSKADESCAVWINPILQDMLRHIFQSCILESNDEILELIQKVWM
ELLSQVPQQFVVAASCPWMGAWLCLMMQASHIPIDLNMLLEVKARSKDKTGAKARLGNNQ
VKETVQQYIAGAETVADDPLTRDYVVVRARLMAARLLGALCRCICDPQLNSASQEIRPAE
SLGQLLLFHLNSKSALQRIAVALVLCEWAAQQKDCQMVSSMVQPRLLAVLTEQLYYDEIA
IPFTRMQNECKQLISLLAEVQIDLQDRLNSSVFTIDQANELVTTIFTETTAGLNVKSKQW
LALESKRQQAQSTVMETNTEWQQLHLRVHMFTACAAINLEVLPDKLNPLVRPLMETVKKE
ENTLIQSYAASFIANLLRQCAVRSPCPNPKIIKNLCASACMDPSATPSSVCPVPTAQEQA
KGGGLERDGMHHIVNKTQGIITLYRHQRAAFAITSKRGPTPKAPKAPVTELPPGSMISSD
NDESKKQFLVQRRGAEFALTTIARHFGADLNRSLPYLWENTVGPLKAVAKENLCIDRQAQ
LDRGDAAAQELVNSLQVLEVMAGAMAAELRPLLLEHLPHLFTCLQHPYTAVRHMAARCVG
VLSKIATLETMNSFLESVLHWLAAIDDCTKQEGAIEALACVMEQLDVDIVPYIVLLVVPV
LGRMSDPSDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLIQQKARERQFLEQLLDGR
KLENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDQYL
RAQEYAKTKAADCSPLPSLVVCPPTLTGHWVDEVAKFCSREFLNPLHYTGPPTERMRLQH
QVKKHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANFRVIL
SGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEA
LHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKASVEDSISAA
SSEEEEKPKLKATGHVFQALQYLRKLCNHPNLVLTPQHPEYKRITDQLACQNSNLRDIQH
APKLSALKQLLLDCGLGGSGGAEGGTEAVVAQHRVLIFCQLKSMLDIVEHDLLKPKLPSV
TYLRLDGSVPAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMR
DLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVINQENTSLHSMGTD
QLLNLFTLDKDDKSDKGEQSSSTSGKASIKSVLDGLGELWDQQQYDSEYNLDSFMNSLH
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggctgtatcaagacttgaccgtttgtttatcttgcttgacactggaaccaca
ccagtaaccaggaaagcagcagcccagcaacttggagaagtggtgaaacttcacccacat
gaactcaacaacctcctgtcaaaggtgcttacctatctacggagtcccagctgggacact
cgaattgcagccggccaagccgtggaggccattgtgaaaaatattcctgagtggaacccg
gctccaaagccaaaggaagagtcccgtgaagacctgtctccggaggactcgtcctgtgac
cggttgaatttttaccattttgacatctcccgcctgctcaggcatggcgcatcgctgctc
ggatctgcaggagccgagtttgagctgcaggaagacaaaactggtgagatggatcctaag
gagcgtctggctcgtcagaggaagttgctccagaagaagctgggtctggatatgggagct
gctataggaatggacacagacgagctgttcaacgatgaggacctggactattcctgccat
cccagcggctttaaagcccaaggattcagagctgcagctggctgcagctcccgcaaccac
gtgactattcaagctgctgaattgatcgactcggagttccggcccggcatgagcagccgt
cagaagaacaaagccaaaagattggctaaactcgtggcaaaacaaaaatccagagacgtg
gatcctaatgagaagagcaatgacagcttagaaggtgaacctgaggagaaacggaggaaa
acaaccaacgtcgtaatcgaccagcctgcaacagagcataaggttttaattggcaacgtt
ccagacaactctggtcttttagaggagtcacacgagtggccgttggagagcttctgtgaa
gagctttgtaacgacctcttcaacccatcctgggaggttcgtcatggtgcgggcaccggc
ctcagagaaatcctgaagtctcatggtactggtggtgggaaactggttggaagcactgca
gaacagatgttgcgacagcatcaggagtggatcgaggatctggtcattcgtctcctctgt
gtgtttgctttggaccgctttggggactttgtatctgatgaggtggtggctcctgtcaga
gagacgtgtgcccagacgctcggcgtcgctcttcttcacatgagtgaaaacagcgttgcc
atgacggtggacgtcctgctgaagctgctgaaggaggaccaatgggaggtccggcatgga
ggcctgttggggatcaaatatgccttggcagtccgacaggacctgatttccgtcctgctt
ccccgggtcctgcctgcaataaccgaaggtctgcaggacctggatgatgatgtcagggcg
gtggctgctgctgctctcatcccagtggtggaagggttggtccagcttctgcccaacaag
gttccttttattgtaaacacactatgggacgcactcctggacctggacgacctcaccgct
tccaccaacagcatcatgacgctgctgtctttgctgctgacctttcctcacgttcggcaa
tgcagcatggagcagtcactgactgtcctggttcctcgagtttggccttttttaagacac
accatatcatccgtaagaagggctgcgctggaaacgcttttcacactgctgtctaaagct
gatgagagttgtgcggtttggataaatcccattttacaagatatgttgcggcacatcttc
cagtcttgtatcctggagagcaacgacgaaatactggagctcattcagaaggtgtggatg
gagctgctgtctcaggtcccccagcagttcgtggtcgcagccagctgtccttggatgggc
gcctggctctgcctgatgatgcaagcctctcacattcccatagacctgaacatgctgctg
gaggtgaaggcccgctccaaggataagactggagcaaaggctcggctaggaaacaatcaa
gtgaaggaaacggtccagcagtacatagccggggctgagactgtagcagacgatccgttg
acgagggattacgtggtggtccgtgccaggcttatggccgccaggttgctgggagctctg
tgtaggtgcatctgtgaccctcagctcaactccgcatcccaggagatccggccagccgag
tctttgggccagctgttgctcttccatctcaactccaaatcagccttgcaacggatagcc
gtggctctggttctctgtgagtgggctgcacagcagaaggattgccagatggtgtcgtcc
atggtgcagccgcggcttctggctgtcctgaccgagcagctgtactacgacgagatcgcg
attcctttcacgcgcatgcagaatgaatgcaagcagctcatttcgttgcttgctgaagtt
cagatagaccttcaagatcgcctcaacagcagcgttttcaccatagaccaagccaacgaa
ctggttaccaccatcttcacagagacgacggcaggtctgaacgtgaagtccaagcagtgg
ctggcgctggagagcaaacgacagcaagcccagtctacggtgatggagaccaacacggaa
tggcagcagctgcacctgcgcgtccacatgttcaccgcctgcgccgccatcaacctggaa
gtgcttcccgacaagctcaaccctctggtgcggccgctcatggagacggtcaagaaggag
gagaacaccctgatccagagttacgccgcttcgttcatagccaacctgctgcggcagtgc
gccgtccgctcaccgtgccccaacccaaagatcatcaaaaacctctgcgcttcggcgtgc
atggacccctcggccacgccctcgtccgtttgtcccgttcccacagcgcaagaacaggct
aaaggaggtgggctggaaagagatggcatgcatcacatagtcaacaaaacccaggggatc
atcactctgtaccgccaccaacgggccgcgttcgcaattacaagcaaaaggggtccgaca
ccgaaggcgccgaaagccccggtgacagagcttcctcctggcagcatgataagctccgat
aacgatgagagcaagaagcagtttcttgttcaaagacggggagcggagtttgccctaacg
accattgctaggcactttggtgcagacctcaaccggagtctgccgtacctctgggaaaac
acggtgggacccctgaaggcggtcgccaaggagaacctctgcatcgacaggcaggcccag
ctggacagaggcgatgcggcagctcaggaattggtcaactctctgcaagttttggaagtc
atggctggagccatggcggctgaacttcgacctttgttactggaacacctacctcatttg
tttacatgcctgcagcacccgtacacagcggtgcggcacatggccgcgcgctgtgtgggc
gtgctcagtaagatagccacactggagaccatgaacagtttcctggagtctgtgctccac
tggttagctgctatcgacgactgcacaaaacaggagggcgccatcgaggcgctggcttgt
gtgatggagcagctggatgtcgacatcgttccctacatcgtgctgctggttgttcctgtt
ctgggccgcatgagcgaccccagcgacagtattcgttttatggccactcagtgcttcgct
acgttaatccgcctgctgcctttagaggcaggaataccagacccgccggccatgtcggcc
gacttaatccagcagaaagcgagagagcgccagtttctggagcagctgctggacggcagg
aagttggagaactataagatccctgtgccgattaaagccgagctcaggaagtatcagcag
gacggcgtgaattggctggcattcttgaataaatacaagctgcacgggatcctctgtgac
gatatgggcctggggaagacgctgcagtccatctgcatcctggcaggagatcagtacctc
agggctcaagaatatgcaaagaccaaggcagcagactgcagccccctgccctcgctggtg
gtgtgtccgcccacattaacgggccactgggtggacgaagtggccaagttctgctccaga
gagttcctcaacccgctgcactacaccgggcctcccacggagcgaatgcggttgcagcat
caagtgaaaaaacacaacctggtagtcgcttcttatgatgttgtgcggaacgacatcgac
ttttttagaaatataaaatttaattactgcatcctggatgagggtcatgtgatcaagaat
gggaaaaccaaactgtccaaagccatcaagcagctagcggctaacttcagggtcatcctg
tcgggaacgcccatccagaacaacgtcctggagctctggtcgctcttcgacttcctgatg
cctggcttcctgggaacggaacgccagttcgccgctcgctacgggaaacccatcctggcc
agccgcgacgccaagagctcatccagagaacaggaagctggcgtcctcgccatggaggct
cttcatcggcaggttctgccgttccttctgaggaggatgaaggaggacgtgctccaagac
cttcctcctaaaataatccaggactattactgcactctgagccctctccaggttcagctt
tacgaagactttgcaaagtctcgcgccaaagccagcgtggaggacagcatctctgcagcc
tccagtgaggaagaggagaagcccaagctgaaggctacgggtcacgtcttccaggcgctg
cagtacctgcggaagctctgcaaccacccaaacctggttctgacgccgcagcatccggag
tacaaacgcatcacggatcagctggcgtgtcagaactccaacctgcgcgacattcagcac
gcgccgaagctctctgctctcaagcagctgctgctggattgcggtcttggcggcagcgga
ggagcggaaggcgggacggaggcggtggtggcgcagcatcgtgttctcatcttctgtcag
ctgaagagcatgctggacatcgtggagcacgacctgctgaagcccaaactgccctctgtc
acctacctgcggctggacggcagcgtgccggccggcctgcgccactctatcgtctccagg
tttaacaacgatccctccatcgatgtgctgctgctcaccacccatgtcggtggtctgggt
ttgaacctcaccggcgcagacactgtggtgtttgtggagcatgactggaaccccatgagg
gacctgcaggccatggaccgcgcccatagaataggacagaaacgggtggtgaacgtttac
cggctgattacgcgaggcacgctggaggagaagatcatgggtctgcagaaattcaagatg
agcatcgccaacaccgtcatcaaccaggagaacaccagcctgcacagtatgggcacagac
cagctgctcaacctcttcactctggacaaggacgacaaaagtgacaaaggagagcagtcg
tcatcgacctcagggaaggcgtccataaagtccgtgttggacggcctcggggagctgtgg
gaccagcagcagtacgactcggagtacaacctggacagcttcatgaactcgttgcactag
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