Poeciliopsis prolifica (blackstripe livebearer): 129352636
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Entry
129352636 CDS
T09758
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129352636 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprl03021
]
129352636 (polr1b)
Enzymes [BR:
pprl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129352636 (polr1b)
Transcription machinery [BR:
pprl03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129352636 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
129352636
NCBI-ProteinID:
XP_054877696
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MEPSDKWTNLPQGPSLKNLTDGGFGRLRDEQQAAVQDLTKAHIESFNRAVTEGLARLVLA
IPPLEFMFRQDKVTLAFVEASIHNPMVSKGSVCTEMKVYPAECRGRKCSYRGKLVADISW
AINGIPKGIIKQSLGQVPIMVKSKLCNLHGLSPKELVKHHEEAEEMGGYFIMNGIEKVIR
MLIQQRRNFPVAMCRPKWKSRGQGYTQYGISLHCVREEHSAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGSEDNSFYKTCVSEMLRMVSEEGCTTRSKV
LDYLGARFRVKLSTPEWYTNEQCANFLLSECVCIHLKSDLEKFYLLCFSTRKLFSFAKQE
CMEENPDSLMCQEVLTPGQLYLMFLKEKLTMWLTSVKISFDKRGTKLTGELSTENVMKLL
STGSDLTKPFEYLLATGNLHSKTGLGMLQMTGLCIVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEVVTATAYTTTLPALLCSLGVT
PVDGPPGQAFSDCYPVVLDGSVVGWVEADLARSVADSLRRFKVLGQKKVPPWTEIILVPK
TGKPSLYPGLFLFTTPCRMMRPVQNLALGKQELIGTFEQLYLNVGILEAEIEPGVSTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFTDRSDNKLYRLQTPQSA
LVRPYMYDHYNLDNYPSGTNAVVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LADKVKGEDGVVFGAKPGDPKVNGKLDADGLPRIGSVLRRGDPFYSYINLNTGQSHVHFY
RSEEACVVDNIKVCSNDTGSGLFKRVCITVRVPRNPMIGDKFASRHGQKGILSRLWPAED
MPFTESGMSPDILFNPHGFPSRMTIGMLIESMAGKSAAMHGLSHDATPFTFSEQNSALEY
FGEMLRAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPLGGRNVQGGIRFGEMERDALLAHGSSFLLQDRLFNCSDRSVAQVCLDCGSLLSPLL
EKPPPFWSAMRHRKTVCSLCGRSDSVDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggagccttctgataagtggacgaatttgcctcagggaccgagtctgaagaacctgacg
gatggaggcttcgggaggctgagggacgaacagcaggccgccgtccaggacctgaccaag
gcccacatcgagtcctttaaccgggccgtcactgaggggctcgcgcggcttgtcctggcc
atcccacccctggagttcatgttcagacaggacaaagtgaccctggcctttgtggaagcc
tccatccacaacccaatggtcagcaagggcagcgtctgcaccgagatgaaggtttacccc
gcagagtgccgaggcaggaagtgctcctacagaggaaagctggtggcggacatcagctgg
gcgatcaacggcatcccgaaaggcatcatcaagcagtccctgggtcaggtgccaatcatg
gtgaagtccaagctctgcaacctccacggcttgtcgcctaaggagctcgtaaagcatcat
gaagaggcagaggaaatgggaggttacttcatcatgaacggcatcgagaaggtcatccgc
atgctgatccagcagaggaggaactttccggtcgccatgtgcaggcctaagtggaagagc
cgcggtcagggatacacccagtacggtatctccttgcactgcgtgagggaggagcactcg
gccatcaacatgaacctccactacctggagaacggcaccgtgatgctgaacttcatctac
cagaaggagctgttcttcctgccgctcggcttcgctctgaaggctctggtggacttcaca
gattttcagatctaccaggagctgatcaaaggcagcgaggacaactccttctataagacg
tgcgtgtcagaaatgctgcgcatggtgtcggaggagggctgcaccacccgcagcaaggtg
ctcgactacctgggcgcacgcttccgggtcaagctgagcacaccggagtggtacaccaac
gagcaatgcgccaactttctgctaagtgaatgcgtctgcatccacctgaagtcggacctg
gagaagttctatctgctgtgcttctcgacccggaagctcttcagtttcgccaagcaggag
tgcatggaggagaaccctgacagcttgatgtgccaggaggttctgactccaggtcagctc
tacctcatgttcctgaaggagaaactaacgatgtggctaacatcggtaaagatttccttc
gataagcgagggaccaagctgaccggcgaactgagcactgagaatgtgatgaagttgtta
tccacggggtcggatttaaccaaaccgtttgaatatctgctggccaccgggaacctgcac
tccaaaacgggtctcggcatgctgcagatgactggcctgtgcatcgtggccgacaagctg
aacttcatccgctacctgtcgcacttccgctgcgtccacagaggagccgccttcgccaag
atgaggacgacgtcggtcaggaagctgctgccggagtcctggggcttcctgtgtccggtc
cacacgccggacggcgagccctgcggcctgatgaaccacatgacggcgagctgcgaggtc
gtcaccgccaccgcctacaccaccacgctgccggcgctgctctgctcgctgggtgtcacc
ccggtggacggtcctccgggtcaggccttctctgactgctacccggtggttctggatggg
tctgttgtcggttgggtcgaagctgatttggctcggtccgtcgccgactcgctgcgccgc
tttaaggttctgggacagaagaaagttcctccctggactgagatcatcctggttcctaaa
actgggaagcccagtttgtatcctggcctgttcctcttcactacgccgtgccgcatgatg
cggcccgtccagaatttggctcttgggaagcaggagcttattggcacgtttgaacagctt
tacctcaacgtggggatcctggaggcggagatagagccgggcgttagcacgcaccaggag
cttttcccccacagcatgctcagcgtggtggccaacttcatcccctactccgaccacaac
cagagccccaggaacatgtaccagtgccagatggggaagcagacgatgggatttccgctg
cactccttcacggatcgctccgacaacaagctgtaccggctccagacgccgcagagcgct
ctggtccggccctacatgtacgaccactacaacctggacaactacccgagcggcaccaac
gccgtcgtcgccgtcatctcctacacgggctacgacatggaggacgccatgatcgtgaac
aagtcatcgtgggagagaggcttcgctcacgggagcatctacaagacagagttggtggac
ctggcggacaaggtgaagggagaggacggcgtggtgttcggggccaagccgggcgacccg
aaggtgaacgggaagctggacgcggacgggctgcctcgcatcgggtcggtgcttcggcgc
ggagatccgttctacagctacatcaacctgaacacgggacaaagccacgtccacttctac
aggagcgaagaggcgtgtgtcgttgacaacataaaggtctgcagcaacgacacaggatcc
ggtctcttcaaacgtgtctgcatcaccgtccgagtgccgcgtaacccgatgatcggcgac
aagttcgccagccgccacggccagaagggcatcctgagccgcctgtggccggccgaggac
atgccgttcaccgagagcggcatgagcccggacatcctcttcaacccgcacggcttcccg
tctcgcatgaccatcgggatgctgatcgagagcatggcagggaagtcggccgccatgcac
ggcctgagccacgacgccacaccgttcaccttctccgagcagaactctgcgctggaatac
ttcggggagatgctgcgcgccggtggctacaactactacggcacggagcggctctacagc
gggctgagcggccaggagctggaggccgacatcttcatcggcgtcgtgtactaccagcgg
ctccgccacatggtgtccgataagttccaggtgcgcacgacgggagcgcgggataaggtg
accaaccagccgctgggaggaaggaacgtccagggcgggattcggttcggagagatggag
cgggacgcgctgctggcccacggctcgtccttcctgctgcaggaccggctgttcaactgc
tcggaccgctccgtggcgcaggtgtgcctggactgcggcagcctgctgtcgccgctgctg
gagaagccgccgccgttctggtcggccatgcgccaccggaagacggtgtgcagtttgtgt
gggaggagcgactccgtggactccgtgtctgttccgtacgttttccgttacttcgtggct
gaactggcagcgatgaacatcaaagtgaaactggatgtgaagtga
DBGET
integrated database retrieval system
