Poeciliopsis prolifica (blackstripe livebearer): 129352874
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Entry
129352874 CDS
T09758
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129352874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129352874
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129352874
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129352874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
129352874
NCBI-ProteinID:
XP_054878042
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MFGATRKKFMEGGIESEYASDDSSLYYNHTSMFAPHRADKDMLSSSSSSSQLSQLGASLY
APQSALGFPIRGINSSAAPQLSRSSLTQPAGQLSNHTSTPNSGPLHTPSSPNRASIMPLT
SSRSVLNHNQQVGGPTGQTGGERGGGGGAGRSGTMGSPSRSSPSIIGMPKQQQARFSFNR
NPGFNMSNSLTSNIFNGTDGSENVTGLDLSDFPALADRSRRDGSSNPTPQLNPLAGRAPY
VGMVTKPSSEQSQDFSIHNEDFPALPGPNYQTKDPNSNSDDKTQNLNSSGKASSSADGPK
FPGDKSSAPSNNNQQKKGIQVLPDGRVTNIPVGMVTDQFGMIGLLTFIRAAETDPGMVHL
ALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKL
SRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPSLKTNAYER
GTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPSTFNYNPAQQAF
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaccaggaagaagttcatggagggggggatcgagagcgagtacgcttcg
gacgactccagcctctactacaaccacacgtccatgtttgctcctcaccgggccgacaaa
gacatgctgtcgtcttcctcctcatccagtcagctgtcgcagctgggagccagtttatac
gccccacagagtgctctgggtttccccatccgtgggatcaacagcagcgcggcgccgcag
ctcagtcgaagctcgctgacccaacccgccggccagctctccaatcacaccagtactccc
aactctggaccgctgcacacgccctcatcgcccaacagggcctccatcatgcccttaacc
agcagccgcagcgttctgaaccacaaccagcaggtgggcggtcccacggggcagacggga
ggagagcgaggaggcggcggtggcgcagggcggagcggcaccatggggagtcccagcagg
tcgtctcccagcatcatcggcatgcccaaacagcagcaggcgcggttctccttcaacagg
aatccaggcttcaacatgagcaactccttaaccagcaacattttcaacggcacagacggc
agtgagaatgtgacggggttggatctgtccgacttcccggcgttggcggaccggagccgg
agagacgggagttcgaacccgaccccgcagctgaacccgctggccggccgggcgccctac
gttggcatggtaaccaagccatccagtgaacagtcacaggacttttcgatccataatgaa
gatttcccagctctccccggtccaaactaccaaactaaagatcccaacagcaacagcgac
gacaaaacgcagaacctgaactcgtcgggaaaggcgtcttcgagcgccgacggtcccaag
ttccccggcgataaaagctcggctccgagcaacaacaaccagcagaagaaaggcatccag
gttcttcccgatggccgagtgaccaacattcccgtcggcatggtaacggaccagtttgga
atgatcggcttgttgacgttcatccgggcggcagagacggatccgggcatggttcaccta
gcgctgggctcagacctcaccacactgggcctgaacctcaactcacctgagaatctgtat
cctaagtttgcgtctccttgggcgtcggcgccgtgtcggccgcaggacatcgactttcac
gtcccgtcagagtatctaaccaacatccacataagggacaaactagcagccattaagttg
tctcggtacggagaagatctgctgttttatctctactacatgaacggaggagacctgctc
cagctgctggctgcagtagaactttttaaccgggactggcggtatcataaagaggagcgg
gtttggataacgcgggcccctgggatggagccctcgttaaagaccaacgcctacgaaaga
gggacctactacttcttcgattgtctcaactggaggaaggttgccaaggagtttcatctt
gaatatgacaaactagaagagcgacctcatgttccctccactttcaactacaatcctgcc
cagcaggccttctga
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