Entry |
|
Symbol |
nup50
|
Name |
(RefSeq) nuclear pore complex protein Nup50
|
KO |
K14295 | nuclear pore complex protein Nup50 |
|
Organism |
pprl Poeciliopsis prolifica (blackstripe livebearer)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pprl00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129352893 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pprl03019]
129352893 (nup50)
Messenger RNA biogenesis [BR:pprl03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129352893 (nup50)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
446 aa
MAKRIADKELTDRNWDQEEEGEEAGTFSVASQDVLKSRAIKKAKRRNTGGESEGGGAFKG
FKGFSMAMPSTTPSSSLTAFSGFGGTGSFKGFGGLSNGTGSTPSLGGFPSAAKTGVAFNG
PSSAQPGADIVAQQTNGSASSPSPAPCSRSREYSRQLTALNQSVRDWISKHVNDNPLCDL
NPIFRDYERHLASIERQYGTGAEETQQGDASIPPPPAPSSSSSSSSVALFSFSKTSTEDS
GQKRSGSAPLPAGVSFNFGQKVDAPTLGSLASKPTVPSFSFSSSSNQSSPFGAAGPSAAV
SFGGTKTSDAPAADDKDEESEEPPKPEVKEVKEDDAFYSKKCKLFYKKETEFKEKGVGTL
HLKRTAEGKTQMIVRADTNLGNILLNILVPPTLPCSRVGKNNVMVVCVPNPPVDDKNPGV
AVPLLIRVKTAEDADELHKTLEEKKG |
NT seq |
1341 nt +upstreamnt +downstreamnt
atggcgaagaggatcgcagataaggagctgacagacaggaactgggaccaggaggaggag
ggggaggaggccggaacgttttctgttgcgagtcaggatgtgttgaagagccgtgccata
aagaaggccaaacgcagaaacactggaggagagagcgaagggggaggagctttcaaaggt
tttaaaggcttctccatggcaatgccctcgaccacgccctccagcagcctcacagcgttc
tctgggtttgggggtactggcagctttaaaggcttcggaggcctgagcaacggaaccggc
tccacgccttcgcttggaggattcccgtctgctgcaaagaccggtgtggcgttcaatggg
ccgtcctcagcccagcctggcgctgacattgtggcccagcagaccaatggctccgcctcc
agccctagccccgccccctgcagccgcagcagggagtacagccggcagctgacggcgctc
aaccagtcggtccgcgactggatcagcaagcatgtgaacgacaacccgctgtgcgacctc
aaccccatcttcagggactacgagcgccacctggccagcatcgagcggcagtacggcacc
ggcgccgaggagacgcagcagggagacgcctccattcctcctccacctgctccctcttca
tcatcctcctcttcctcagtggctctgttctccttcagtaaaacctctacagaagattcg
ggtcagaaacgctccggctcggcgccgctccctgccggcgtctcctttaacttcgggcag
aaggtggacgcacccaccctggggtccttggcgtccaaaccgaccgtccccagcttctcc
ttctcttcctcgtccaatcagagctccccgttcggagcagctggaccctcggctgcagtg
tcctttggcgggaccaaaacttcagatgctccagctgcagacgacaaagacgaagaatcg
gaggagcctcccaaaccagaggtcaaggaggtcaaagaggacgacgccttctactctaag
aagtgtaagttattctacaagaaggagacagagttcaaagagaaaggcgtgggaacgctg
cacctcaaacgcaccgctgaggggaagacccagatgatcgtcagagccgacaccaacctg
ggaaacatcctgctgaacatccttgtgccgcccaccctgccgtgctcgcgggtcgggaag
aacaacgtcatggtggtctgtgtgccgaacccgcccgttgacgacaagaacccgggcgtg
gccgtccccctgctgatccgagtgaagaccgccgaggacgccgacgagctccacaagaca
ctggaggagaaaaaaggctga |