Poeciliopsis prolifica (blackstripe livebearer): 129353011
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Entry
129353011 CDS
T09758
Symbol
rnf180b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129353011 (rnf180b)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129353011 (rnf180b)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129353011 (rnf180b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF180_C
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
129353011
NCBI-ProteinID:
XP_054878198
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MNGKKLRCRRCRRAVGDASCLVTAADSSPATCCIWHMDVDHLPEWIWTSVQQAIWTSGKL
NCFHCGARLGGFSFLNRYRCPCGRDATVHFSRSRVDLDQKPRLLIVPPHRPGRGSAQAQQ
EEPVCAPDPVCAPDPVCAGGTPQHGAAGDMDAPQLDPSVRRTTELKAEADHEVWSDAVPW
ESGAPAGLASLASLGSPSAAPQKSDEVCFTSEGEAEQQEEVVSSAQGPGVLSSLARTRLS
KTDQNRLKSRRRKQRRRERWLQSQLQEEEEDEPAQSSPACPPACEDADRDGLTCAVCLDV
FFRPRSCLPCAHVFCEPCLRRLARNRAAHTPCPLCRRLICNTGFHRELDHRARTLFPKVW
ATRRQNFQNSLSARWPLPSSREQTRFVCCHGRSAEAAWRRWRLTPRPFDPGVPGLPQLPF
ATLIILFIVSFALLLYLAGFFFTLFS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaagaagctccgctgtcggcgctgccgcagggccgtcggagacgccagctgt
ttggtgacggcagcagactcctctccggccacctgctgcatttggcacatggatgttgat
catctaccagagtggatctggacctcggttcagcaggccatctggacgtccgggaagctg
aactgcttccactgtggggctcggctgggcggcttcagcttcctgaaccggtaccgctgc
ccctgcggccgcgacgccaccgtccacttcagccgcagccgcgtggatctggaccagaag
ccccgcctcctcatcgtcccgccgcacaggccgggccgcgggtcggcgcaggcccagcag
gaggagccggtctgtgctccggacccggtctgtgctccggacccggtctgtgccggcggg
accccacagcacggtgccgccggagacatggacgcgccgcagctggacccgtctgtccgg
agaacaacagaacttaaggctgaagcggatcatgaggtttggagcgacgccgtcccctgg
gagtctggcgctccagcaggattagcatcgttagcatcgttaggatcgccatctgcagcg
ccgcagaaatcagatgaagtttgtttcacctctgagggagaagcagagcagcaggaggaa
gtggtgtcgtccgctcagggccccggggttctgagctccttggcccggaccagactgagc
aaaacggaccagaaccgactgaagagtcggaggaggaagcagaggaggagagagagatgg
ctgcagagtcagctgcaggaggaagaggaggacgagccggcccagtcgtccccagcctgt
cctccggcctgtgaggacgcggaccgggacggtctgacctgcgctgtgtgtctggacgtg
ttcttccggcctcgcagctgcctgccctgcgctcacgtgttctgtgagccgtgtctccgg
cgcctggcccggaaccgcgccgcccacacgccgtgcccgctctgccgccgcctcatctgc
aacaccggcttccacagagagctggaccaccgggccaggactctgttccccaaggtctgg
gccacacgcaggcagaacttccagaactcgctgagcgctcgctggccgctgcccagctcc
cgggagcaaacacgcttcgtatgctgtcatgggcgaagcgcggaggccgcgtggcgacgc
tggcgtctaactccacgaccctttgacccgggcgtgccgggccttcctcagctgcccttt
gccacgctcatcatcctcttcatcgtgtccttcgcgctgctcctctacctcgccggcttc
ttcttcacattattctcatga
DBGET
integrated database retrieval system
