Poeciliopsis prolifica (blackstripe livebearer): 129353099
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Entry
129353099 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: TATA box-binding protein-associated factor, RNA polymerase I, subunit C-like
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprl03021
]
129353099
Transcription machinery [BR:
pprl03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
129353099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
rve_2
TAF1C_C
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
129353099
NCBI-ProteinID:
XP_054878271
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MDYQFPQQLFPSFFSCEPPNRVQRHDAGGWGCYHGALPQGGSGSLSSWAFTSKRRVGGEV
WRQTEPVPVPLLSPRNAFQDLVTPPEPLDFLKHMHNFFMDHGPDAFGCMSEILGENFHFQ
KAREKKKYWKDSINMWRMKRFTNQLKFNICPMAYRSRRLERYAGLXWDVVHDVPPELLGS
LLYEELTEQRERMQFSEAATGGALAFVPFSQSEGCLLYPGGPGMDRLNFHRVVLERDGAA
CVDAAGRKPVSFQLTAPVRQISCGSRFGDSCVAVRSDHVCGVWGTGEQKEPRLLQAVGTR
AAASCVSVSPHILGEVLVASESGAATLWTVGRGMQTIRTEESNLYFNAKSSWRWCEFSAH
PRVMVYADRTGAELTDFRAKLDSNPGYTLFRISSTSDCHSGERLLLVRFLGDVHPFHHLL
TTQHSAYIMDERFPCVPMLKWDHMMEAPPLFCHVAPGSGTTKVLLGSQSSQEITLLQYSG
GAAEACCSHGSPQVLLRPRDSLALLPVQIPHSQQNAAHRLASPAAGLTCFQKTSVSTATM
VVLQLTAAGDVFYQILERDDGKPGAPETGAPETGAPETGARSPLLVAEMSSDEDIVMPTQ
APNTCMFVPETPDGNRSSDRPPDQIPAFVAVDNEADRSARSVLSGATRLAWRRWLQKLRR
QERKPGAPPHLAVQTVGLLSVLEPGAAASRMQMALQQDLQRCMRTRSLLLNSDLDPVPVP
PLVNAKAWHDLLSHRLTTAWRGGQEAWREWWQEERGENRAWRKEALRRKRRREKEAQRAA
GRHLQLSGSFTSSVSYQTELDDLSGWSSGASGPLTDSQRSRPLGQLAAFLEDWDDSPAPP
DHXDPPSRTPEPQPANQRSRNLADQSLSSLWETQDDPPLHPAPSSSSQWPSFSSLTPSKA
SQSQRGAPQASQPKKKKSRMGF
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggattatcagtttccgcagcagcttttcccctcgtttttcagctgcgagccgccgaac
cgggtccagagacacgatgccggaggatggggctgctaccacggagccttgccgcagggc
ggcagcggctctctgtccagctgggcgttcacgtccaagcggcgggtcggaggggaggtc
tggcgccagacggagccggttccggttcccctgctatcacccaggaacgcgttccaggat
ctggtgacgcctcctgagccgctggacttcttaaaacacatgcacaacttcttcatggat
cacggcccggacgccttcggctgcatgagcgagatcctgggcgaaaacttccacttccag
aaagccagggagaagaagaaatattggaaagattcgatcaacatgtggaggatgaagcgt
ttcaccaaccagctgaagttcaacatctgtcccatggcgtaccggtccaggagactggag
cggtacgccggcctgnnctgggacgtggtccacgacgtcccgccggagctgctgggctcg
ctgctgtacgaggagctgaccgagcagagggagcgcatgcagttctccgaggcggccacc
gggggcgctctggccttcgtcccgttctcacagagcgagggctgcctgctgtaccccggg
ggcccgggaatggaccgcctcaacttccacagggtggtgctggaacgcgacggcgccgcc
tgcgtggacgccgccgggcggaagccggtcagcttccagctgacggcgccggtccgacag
atcagctgcggctcgcgcttcggcgacagctgcgtcgccgtgcgctccgaccacgtctgc
ggcgtctgggggacgggggagcagaaggagccgcgcctgctgcaggcggtcggcaccaga
gccgctgccagctgcgtcagcgtcagtccgcacattctgggtgaagttctggtggcgagc
gagagcggagcggcgaccctgtggacggtcggccgagggatgcagacgatccggacggag
gagagcaacttgtacttcaacgccaagtcgtcatggcgctggtgcgaattctccgcccac
ccacgagtgatggtgtacgccgaccggacgggggcggagctcacagacttcagggcgaag
ctggactcgaacccgggttacactctgttccggatcagcagcacctcagactgccacagc
ggagagcgcctcctgctggtcagattcctgggagacgttcacccctttcaccacctcctc
actacgcagcactcggcctacatcatggacgagcgcttcccctgcgtccccatgctgaag
tgggaccacatgatggaggctccgccccttttctgccacgtggctccgggctccggaacc
accaaggttctgcttgggtcgcagtcctcccaggagatcactctgctgcagtactctgga
ggcgctgcagaggcctgctgcagccacggttctcctcaggttctgctccgacccagagac
agtctggctctgctcccggtccagatcccccacagtcagcagaacgccgcgcacagactg
gcttcaccggctgcaggcctgacgtgtttccagaagacgtccgtctccacggcgaccatg
gtcgtcctccagctgacggcggcgggggacgtcttctaccagatcctggagcgggacgac
ggaaaacctggagcgccagagaccggagcgccggagaccggagcgccagagaccggagcg
cgatccccgctgctggtcgctgaaatgtccagcgatgaggacatcgtcatgccgacgcag
gctcccaacacttgcatgtttgtcccagaaacgccggacgggaaccggagttcggatcgg
cctccggatcagatcccggcgttcgtcgctgttgataacgaagcggatcggtcggctcgc
tcggtgctgagcggcgccacgcgtctcgcctggaggcgctggctgcagaagctgaggaga
caggagaggaaacccggcgctccgccgcacctcgcggtccaaaccgtaggactactgagc
gttctggagcccggcgccgccgccagccgcatgcagatggcgctgcagcaggacctgcag
cgctgcatgcggacgcggtcgctgctgctgaacagcgacctggacccggttccggtgccg
ccgctggtgaacgccaaggcgtggcacgacctgctgagccaccgcctgacgacggcgtgg
cgcggcggccaggaggcgtggcgggagtggtggcaggaggagcggggggagaaccgggcc
tggaggaaggaggcgctgaggaggaagaggaggagggagaaggaggcgcagcgcgccgcg
gggcgccacctgcagctcagcggcagcttcacctcctccgtcagctaccagacagagctg
gacgacctctccggctggtcctcgggggccagcggcccgctgaccgacagccagcgcagc
aggcctctgggccagctggccgccttcctggaggactgggacgactcgccggcgccgccg
gaccatnctgatccgcccagcagaactccagagccacaaccagccaatcagaggagcagg
aatctggccgaccaatcactgagctctctgtgggaaacacaggatgatcctcctcttcat
cccgccccctcctcctcctctcagtggcccagcttctcctctctgacgccctccaaggcg
tcacagagccagcggggggcgccgcaggcgtcccagcccaagaagaagaaatcccggatg
ggattctga
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