KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129353225
Entry
129353225         CDS       T09758                                 
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03082  ATP-dependent chromatin remodeling
pprl03083  Polycomb repressive complex
pprl04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129353225
   03083 Polycomb repressive complex
    129353225
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    129353225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pprl03036]
    129353225
Chromosome and associated proteins [BR:pprl03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     129353225
  Histone modification proteins
   HAT complexes
    HATB complex
     129353225
   HDAC complexes
    Sin3A-HDAC complex
     129353225
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     129353225
    PRC2.2
     129353225
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     129353225
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    129353225
  Chromatin remodeling factors
   NuRD complex
    129353225
   NuRF complex
    129353225
   NuRF complex (fruit fly)
    129353225
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_RIG_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 eIF2A WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT140_1st MIOS_WD40 NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 129353225
NCBI-ProteinID: XP_054878445
LinkDB
Position
Unknown
AA seq 426 aa
MAEKEVYDDAVEERVINEEYKIWKRNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
TVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCVIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGTGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSSEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQG
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggctgaaaaggaggtgtacgatgatgcagtggaagaaagggtcatcaatgaagaatac
aagatctggaagagaaacactccatttctgtacgacctggtcatgacccatgccctggag
tggcccagtctgactgtgcagtggcttccagatgtcaacaggccagaggggaaggactac
acagtccaccggctggttctggggacccacacatcagatgagcaaaaccatcttgtaata
gccagtgtccaggtaccaaatgatgatgcccagtttgatgcatcacactacgatagtgaa
aaaggagcagagtttggcgggtttggctcagtgagtggaaaaatagagattgaaatcaag
attaaccatgaaggagaggtgaacagagcacgctacatgccccagaatccctgcgttatt
gccaccaaaactcccacatctgacgttctggtctttgactacaccaagcatccatcaaag
ccagatcccagtggggagtgcagtcctgacctgaggctcaaaggtcaccagaaagaaggt
tacggcctttcctggaatccaaacctcagtggcaacctgctcagtgcctctgatgaccat
accatctgtctgtgggacatcggcaccggcccaaaggaaggaaagattgtcgacgctaag
accatcttcactggtcacacggcagttgtggaagacgtgtcgtggcatttactccatgaa
tccttgtttggctctgttgctgatgatcagaaactaatgatatgggacactcgttccaac
aacacttctaaagccagccactcggttgatgctcacactgctgaggtcaactgtttgagc
ttcaatccctacagcgagttcattcttgctacaggttctgcagataagactgttgcattg
tgggatctaaggaatcttaaactgaagctccactcttttgagtcccacaaggatgaaatt
ttccaagtccagtggtcacctcacaatgaaaccatcctggcctccagcggtactgaccga
cgtctcaacgtctgggatctcagtaaaattggggaggagcagtcttcagaggacgctgag
gacggcccaccagagcttctgttcatccatggtggccacacagccaagatttcagacttc
tcctggaatcccaatgaaccctgggtcatctgctctgtgtctgaagacaacatcatgcaa
gtctggcagatggcagaaaatatctacaatgatgaggagccagacaacacacctgcatca
gagctggaggcacaaggatga

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