KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129353590
Entry
129353590         CDS       T09758                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pprl03009]
    129353590 (rrp9)
Ribosome biogenesis [BR:pprl03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    129353590 (rrp9)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_EML EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 CFAP251_N Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_WDR75_1st DSE1_N WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_IP5PC_F ASA1 Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_IFT140_1st PAC11 Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_DCAF12 PEP5_VPS11_N Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_ACSF4 WDR54 WD40_like Ntox15
Other DBs
NCBI-GeneID: 129353590
NCBI-ProteinID: XP_054878916
LinkDB
Position
Unknown
AA seq 485 aa
MSSFFIKTKGNPKTTKKGKETAAVKRKADGDSGAQSKIRAKKSSSKYNEEISSDSEVESP
NESKKRQAKDEIEFEETPQEKKLRLAKLYLEQLKEEEEKKAEDESFEADLIAGRLQEEVL
EQKGKLQRLIAKDLMAPDASEIRLLRGHKLPITCLVITPDDRCIFSAAKDCSIIKWDVEN
GKKLHTIHGGRKGTEDRHVGHTAHVLCMAISSDGKYLATGDMNNLIMIWEGETCKHLHKF
TGHKGPVSGLSFRKGTHELYSASHDRSVKVWNVDENAYVETLFGHQDVITGLDSLSRERC
VTAGGRDGTVRVWKIAEESQLVFHGHEGSIDCVQLINEEHMITGADDGSVSLWSVNKKKP
LGTVKRAHGCRGEPGLEQPHWVSSVAALHNSDTVASGASGCSHNSQVNVWKCGHNYRSLE
LLFSVPVSGFINSLKFSSAGQFLVAGVGQEHRLGRWWRLKEAKNGIYIIPLKRKPSNPEE
AKQTE
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgtcgtcatttttcattaagacaaaagggaatcctaaaacgaccaaaaaaggcaaagaa
acagcagcggttaagcggaaggctgatggagattcaggagcacagagcaaaatacgagca
aagaaatccagcagcaaatacaatgaagagatttccagtgactcagaggtggaaagtcct
aacgaatccaagaaaaggcaggccaaagacgagattgagtttgaggaaactccacaggag
aagaagctcagattagccaaactttatcttgaacaactaaaagaagaagaggaaaagaaa
gctgaggatgagtcatttgaggcagatctgatagctggacggcttcaagaagaagtgctt
gaacagaaagggaagctccagcgtcttatagccaaagatttgatggcaccagatgcttca
gagatcagattgctaagaggtcacaaactaccgattacgtgtctggttataactcctgat
gacagatgtatcttctcagctgccaaagattgctccataattaaatgggatgttgaaaat
gggaagaagctccatacaatacacggtggaagaaaaggtacagaagaccgccatgttgga
cacacagctcacgtcctgtgtatggccatatcatccgatgggaaatacctggccacagga
gacatgaacaatctgataatgatttgggagggagaaacgtgtaaacatctgcataaattt
acaggacacaaaggcccggtgtcgggtctttcattcaggaagggaactcatgaactgtac
agcgcctctcacgaccgctcagtcaaggtgtggaatgtagatgagaacgcatacgtggaa
actctattcggccatcaggatgtgatcaccggactggacagtctgagccgtgagcgctgc
gtcactgcaggtgggcgggacggcaccgtcagagtgtggaagatagcagaggagtcgcag
ctggtgttccacggacatgaaggttcgattgattgtgtccagctcataaatgaggagcac
atgataacaggagcagatgacggctcagtgtctctttggagcgtcaacaagaagaagcct
ctcggcacggtgaagcgggctcacggctgccgtggcgagccggggctggagcagcctcat
tgggtgtcctcagtggcagcgcttcacaattcggatactgtagcctcaggtgcctctggc
tgttctcacaactcccaggtgaatgtgtggaaatgtggccacaactaccgtagcctggag
cttctctttagtgtgccagtgtctggtttcatcaacagtctgaagttttcgagcgctggg
cagttcttggtggctggtgtcggacaggagcacagattgggacgatggtggagattgaaa
gaagccaaaaatgggatttatatcattcctctaaaaagaaaaccatcaaatccagaagaa
gcaaaacagacagaataa

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