Poeciliopsis prolifica (blackstripe livebearer): 129353659
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Entry
129353659 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: interphotoreceptor matrix proteoglycan 1
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pprl00536
]
129353659
Glycosaminoglycan binding proteins [BR:
pprl00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
129353659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEA
Motif
Other DBs
NCBI-GeneID:
129353659
NCBI-ProteinID:
XP_054879001
LinkDB
All DBs
Position
Unknown
AA seq
1432 aa
AA seq
DB search
MLQAAGLLVLLAVTSPAAAIRAGGGVAAHSVESGGTLGLADLLKSSSRPSAWEPSRHRSR
RSVFLQPGVRICSQESVDEVLASHQAYYQLRVCQEAVWEAFRIFLDRIPGTWEYQAWVRS
CQQEALCISDIARNFSSSEEHMGLIHRRMKNRRERRPDTVRHGDGGGTRGTDGQSSWFSV
YMEAAFCRLTAHMWFPSCRLGTLVLKCSEAPPISSSSPPPAIIIITSAAPPTPATDRTGP
AGPDQEDPELPNLVPEGPEVHVVRFSVKLLDPGYRQLLGEPDSPEYLDLATHLQDQMRLV
FDRXPGFKAVSVLGIRDTLEPDRSLTPGLKASANFRRVCASTHPSPMIRTSAGEPLTKKH
LRENQQRIKMREQAGLVVLYFRAEGISVHYSVVFENNIHHAETTGEPEASAGSGLRDMMV
QALQEKASLPVDLDSLNFHPEVIALPTPTSAATEEINEPSESDSHNEFKVFTPEPEMNER
HPLTPKEKENDLVTLLDSTTVSHGETITVTDGVTLIRDDPPASEDIIDDSEEIYMIEPEL
LSQEQVEEELLLITHEIESIHQEETGELVRVYIPTPTLLLQGEADNPFITSSPNLISEEN
LSPAEKEEKVLCLNQQLRFYSLQALARRSCMTSQLQLFNMQTSQTSHPQSHXPKEEEDIN
ALPDEENVDLGLSKPKRSDVLDQESQDVRSLQTEVELLEPEEDSVILEVLRPNFEKVEVS
EPGDVAVERSESGEATFEVSAPDKEEKPSESITAETEAPEVSEPHQEVRQAAVDVSIQEK
DSTKASETKKQSVVKSQDEVTEPEIVAHIIEKDLETLKSVESEESLLETDSDDTKPEVFT
GQGVELEKEIVELTELKEEQREKVIEVSLLIPQLEETLVESQKKRKRWCLLAPKMKPFIP
NADLEDEEVVVVSLDGRPVEIAQPEPSSQPEKKTEATSKSPELETVSEPDKDRLDFLPDL
NKGPEPGKEVVEPEPKRDSTEPDIGFIKILQTLESMEELHYREDSVQVVGEDPLDGSDQL
NPSVEDNPTAIPGLLHPLEEKASNRIYPITEEADTKEDIDRTNIEVEREASPFRPPGPVQ
TDRPIEAATSVSAAEPEVQSEDTGVTNNASSKTQEEEEMFVTHSPVSEALPAPPPSVDLV
QVPTSGPTEVSGPFELTEDTSEPEPPVVPWVETANPESLTASPGGETFSEDLDQSNTPSK
ESVDPGSDPTSAAEEDAVPLRYLTTPTMTTASNRQELVVFFSLRLTNMDFSENLFNNTSA
EYRALENTLLDVLLPYLQANLTGFRKLEILNFRKGSVVVNSKMRFSRSVPYNVTEAVRCL
LERFCSAARRLQIDRSSLDVEPADRADPCRFLACGASSRCVVDPRTQEARCQCEPGFLAQ
QNRSCRSICELEPEFCPDGDCHVVPGRGAECRPRGGAQRSGPTRWIGRDQGM
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggctgctggactcctggtgctgctggccgtcacgtcaccagcagccgcaatc
agagcaggtggcggcgtggcggcgcacagcgtggagtctggaggaacgctgggtctggct
gacctcctgaaatcatccagcagaccttcagcctgggagccgagccggcaccgatcccgg
cggtcggtgtttctgcagcctggagtgagaatctgctcccaggagagcgtcgacgaagtt
ctggccagccaccaggcctactaccaactcagagtctgccaggaggccgtgtgggaagct
ttccggatcttcctggacagaattcccgggacgtgggaataccaggcctgggtccgcagc
tgccagcaggaggcgctctgcatctctgacatcgccaggaacttcagcagctctgaggaa
cacatgggcctgatccaccggaggatgaagaaccgcagagagagacgaccagacacagta
agacatggggacgggggcgggacaagggggacggacggccagtcttcatggttttctgtc
tacatggaggccgctttctgcaggctaacggcccacatgtggttcccgagctgcaggttg
ggaaccttggtcctgaaatgctctgaagctccgcccatctcgtcttcatcgcctccacct
gccatcatcatcatcacctccgctgccccgcccactccggccacggaccgcaccggaccg
gccggacccgaccaagaggacccggagctgcccaacctggttcccgagggccccgaggtc
cacgtggtgcggttcagcgtcaaactgctggacccgggctacaggcagctgctgggcgag
ccggactcgccggagtacctggacctggcgacgcacctgcaggaccagatgcggctcgtc
ttcgaccgtnngccgggcttcaaggccgtcagcgttctggggatcagagacacactggag
cctgacaggtctttaactccaggcctgaaggcttctgcaaactttagacgtgtctgtgct
tcaacacacccgagtccaatgatcagaacatcagcaggagaaccactgaccaagaaacat
ttgagagaaaatcagcaaagaattaagatgcgggagcaggcaggacttgttgttttgtat
ttcagggctgaaggaatctcggtccactactctgtggtctttgagaacaacatccatcat
gcagagacaaccggagagccagaggcgtctgctggttctggactcagagatatgatggtc
caggctttacaggagaaagcttctctgccagtcgacctggactccctgaacttccaccca
gaagtgatcgccctgccaacaccaacatcagctgcaactgaagagataaatgagcccagt
gaatctgattcccacaatgagtttaaagtcttcacccccgagccggagatgaacgaacgt
catcctctcaccccaaaggagaaggaaaacgaccttgtgaccctgctggattccaccact
gtctcacatggcgagacgatcacggtgactgatggggtgacgctgatcagagatgatccc
ccggcttcagaggacattattgatgattcggaagaaatttacatgattgaaccagagctg
ttgagccaggaacaagtggaagaggaattgctcctcatcacacatgagattgaaagcatt
catcaggaagaaacgggggaacttgtgcgcgtctatatcccaaccccgacgctgcttctt
cagggggaggcggacaatccatttatcacttcgtctcctaacctgatatcagaggaaaac
ctcagtccggctgaaaaggaggagaaagtcctgtgtttgaaccaacagctcagattttat
tcactgcaggcgttggcaagaaggagctgtatgacatcacaactccaacttttcaacatg
cagacctcacagaccagccacccacagagccattgaccgaaagaggaagaagacatcaac
gctcttccagatgaagaaaatgtagatttaggtttgtcaaaacccaaacgaagtgatgtt
ctggaccaggaatcacaggatgttagaagtttgcaaactgaagtagaactgctagagcca
gaggaagattcagtcattctggaggttttaaggccaaactttgagaaagtagaagtctca
gaaccaggagatgttgcagttgaaaggtcagagtcgggtgaagcaacatttgaagtgtca
gcgccagataaagaagaaaagccatcagagtctatcactgcagagacagaagcacctgaa
gtttcagagccacaccaagaagttcgacaagcagcagtggatgtttcaatccaagaaaaa
gattcaactaaagcatcagagacaaagaaacagtcggttgtcaaaagtcaggacgaagtt
acagagccagaaattgtggctcatattatagagaaggaccttgaaacattaaaatcagtt
gaatcagaagaatcacttctagagacggactctgatgataccaaacctgaggttttcaca
gggcaaggtgtagaactagaaaaagaaatagttgaacttacagaactaaaagaagagcag
agagaaaaagtcattgaggtgtcacttttaattcctcaactagaggaaactctggtggag
tctcagaaaaagaggaagaggtggtgcttgttggctccaaagatgaaaccgtttattcct
aatgcagatttggaggatgaagaggttgtagtggtctcacttgatgggaggccggtggag
attgcacagccagaaccttcttcacaaccagaaaagaagactgaagccacatcaaaaagt
ccagaactggagacagtttcagaaccagacaaagaccgattggactttttaccagactta
aataaaggtccagaaccaggaaaggaggtcgtagagccagagccaaagagagattctaca
gaaccagatattgggttcatcaaaatcctccagactttggaaagcatggaagaacttcac
tacagagaggatagtgttcaggtagtgggggaagatccactggatggttctgaccaactc
aacccatcagtggaagataatccaaccgccataccaggactcctccatccacttgaggaa
aaagcatctaaccgcatctacccaatcacagaggaggctgacaccaaggaggacattgat
agaacaaacatagaggtggagagagaagccagtcccttcagaccaccaggacctgtccag
acggatcgacccattgaagcagcaacatctgtctcagctgcagagccagaggttcagtca
gaggacactggagtgaccaataacgcttcatcaaagacacaagaagaagaagaaatgttt
gtgactcatagcccagtctcagaagctctccctgcacctccaccttctgtggacctagtt
caagtaccaacatctgggccgactgaggtctctgggccctttgagttaacagaggacaca
agtgaaccagaaccacctgttgttccctgggtggaaacagcaaaccctgaaagcctcact
gcctctccaggtggggagacgttttctgaggacctggaccagagcaacactcccagtaag
gagtcagtggaccctggcagtgatccgacctctgcagcagaggaagatgccgttccgcta
agatacttgaccacgcccaccatgaccactgccagcaataggcaggagctggtggtgttc
ttcagcctgcgtctcaccaacatggacttctcagaaaaccttttcaacaacacctcagca
gagtacagagccctggagaacacccttctagacgtgctgctgccgtacctgcaggccaac
ctgacgggcttcaggaaactggagatcctgaacttcaggaagggcagcgtggtcgtcaac
agcaagatgcgcttctcccgctccgtgccctacaacgtcaccgaggccgtccgctgcctg
ctggagcggttctgctccgccgccaggaggctgcagatcgaccgcagctcgctggacgtg
gagccagctgatcgggccgatccgtgccggttcctggcctgcggagcctcgtcccgctgc
gtggtcgacccacggacccaggaggcccggtgccaatgcgaaccgggcttcctggcgcaa
cagaaccggtcctgtcggagcatctgcgagctggagcctgagttctgcccagacggggat
tgtcacgtggttccaggccgaggagccgagtgcagacccagaggtggagctcagcggtcc
ggcccgacgcgttggattggacgggaccagggaatgtga
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