Poeciliopsis prolifica (blackstripe livebearer): 129353751
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Entry
129353751 CDS
T09758
Symbol
cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129353751 (cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129353751 (cnot10)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129353751 (cnot10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_12
TPR_14
ARM_TT21
ANAPC3
TPR_8
TPR_7
APOBEC4_like
Motif
Other DBs
NCBI-GeneID:
129353751
NCBI-ProteinID:
XP_054879104
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MAENSELNEAKHNGSPSSGMTDQEKEMATSAYEAFLAGKYDESLKQLEALQELNKEDYKI
SLNKAVLEFYRSGQTATGLLKQTLSSMKNQLHTATEDVDGLDDVENSLLYYNQAIIHYHM
RQYSEAISIGEKLYQFLEPFEEKFAQSVCFLLVDLYLLTFQPEKALHLLAVLDKISVQGS
NKNGKAESNNSGSNQKVEFVAMMEAAKSKIHQYKVRAYIQMKSSKACKREIKSVMNTAGN
SAPSLFLKSNFEYLRGNYRKAVKLLNSSNMAEHPGPIRTGECVRCMFWNNLGCIHFAMGK
HNLGIFYFKKALQENDHTCAQLGDGGGNNQCKRLSGVPMCALLSNKRYELLYNCGVQLLH
AARPLAAFECLMEAVQVYHSNPRLWLRLAECCISANKGGSEQESKSLPSKKGIIQSVIGQ
GYHRKIVLASQSSQNTNYSEGQSAAIPVASMEFAAICLRNALLLLPEHQQQGAKAESGSK
NSSQSGSTESGSENSDPCSGKSQEADKFFSATPSSPLRKQEVENLRCSILACSAYVALAL
GDNLLALHHADKLLHQTKVSGSLRFLGHLYAAEALISLDRISDAITHLNPENISDVSLGV
LSSEQDQGHEKDEPIEPSAKKMPLFYPSSVAAAQAMMLFNLGSAYCLRSEYDKARKCLHQ
AASVMNSKEIPPEAILLGVYLELQNGNTQLALQIIKRNQLLPSTLHRSSPDPRKKPSQPP
QLPSSFTQVQRK
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaacagcgaattaaatgaggcaaaacataacggctcgccgtccagtgggatg
acggaccaagagaaggagatggcaacgagtgcatacgaagcttttctggctgggaagtat
gacgagtctctgaaacagcttgaagccttgcaggagctcaacaaagaggactacaaaatt
tctttgaataaagctgttttagagttctacagaagtggccagactgcgacaggtttgttg
aagcagaccctttcatcgatgaagaatcagcttcacacagccacagaagatgttgatggc
ttggatgacgttgagaatagtttgctgtactataaccaggccatcatccactaccacatg
cgccagtactctgaggccatctctatcggagagaagctctaccagttcctggaaccattt
gaagagaaatttgcccagtcagtgtgtttcctgttggtggatctctacctgctgacattc
cagccagagaaggcgctccacctgctggccgttctggacaagatctctgtacaaggaagc
aacaagaacggcaaggcagagagcaacaactcaggatcaaaccaaaaggtggagtttgta
gcaatgatggaagcagccaaatccaaaatccatcagtacaaagtgagagcgtacattcag
atgaagtcctccaaggcctgtaagagagagattaaatcagtgatgaacacagcagggaat
tctgctccttctctcttcctcaagagtaactttgagtatctgagaggaaactaccgcaaa
gcggtgaagctgctgaacagctccaacatggcagagcatcctggacccattagaaccggt
gaatgtgttcgctgtatgttctggaacaatctgggctgcatccactttgcaatggggaaa
cacaacctgggcatcttctacttcaagaaggcgctgcaggagaacgatcacacttgtgca
caactgggagacggcggcggcaacaatcagtgtaaaagactgtcaggtgtccctatgtgt
gccctgctgtccaacaagcgatatgagctgctgtataactgtggcgtccagctgctgcac
gccgccaggccgctggcagccttcgagtgtctgatggaggccgttcaggtttaccactcc
aacccgcgtctgtggctgcgcctggctgaatgctgcatctctgctaacaaagggggctct
gagcaggaaagcaagagtttacctagtaaaaagggaataatccagtctgtaattggacaa
ggataccatcgcaagattgttctggcatcacagtcttcacagaacaccaactacagtgaa
ggccagtcagctgccatccctgtagccagtatggagttcgctgccatctgcctgcggaac
gccctgctgctgctgcctgaacaccagcagcagggcgccaaggctgaaagcggctccaag
aactccagccaatcaggaagcaccgagagcggcagtgagaacagtgacccctgcagtgga
aaaagtcaggaagctgataagtttttttctgcaactccatcgtctccacttcgaaaacag
gaggtggaaaacctcaggtgttccattctggcttgtagtgcctatgtggcgctggccctg
ggagacaacctgctggctctgcaccacgctgacaaactgcttcatcaaaccaaggtgtct
ggctccctcaggtttctgggtcacctgtatgctgctgaagctctcatttcattggacaga
atatctgatgcaatcactcacctgaacccagagaacatcagcgacgtgtcactaggcgtg
ctcagcagtgagcaggaccagggacatgaaaaagatgagcccatagagccatcagctaag
aagatgccgctgttttaccccagcagcgtggcagcagcgcaggccatgatgctcttcaac
ctgggcagcgcctactgcctgaggagcgagtatgacaaggcccgcaaatgcctgcatcag
gctgcatctgtgatgaactctaaagagattccgcctgaagccatcctgctgggcgtctac
ctggagctacaaaacggaaacactcagctggctctgcagatcatcaagaggaaccagctg
ctaccctcaacccttcataggtcctcgccagatccgcgcaagaaaccttcccagcccccc
cagctgccctcatcattcacacaagttcaacggaaataa
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