Poeciliopsis prolifica (blackstripe livebearer): 129353807
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Entry
129353807 CDS
T09758
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprl01002
]
129353807 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129353807 (usp48)
Enzymes [BR:
pprl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129353807 (usp48)
Peptidases and inhibitors [BR:
pprl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129353807 (usp48)
Ubiquitin system [BR:
pprl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129353807 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
DUF6276
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
129353807
NCBI-ProteinID:
XP_054879228
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MAPRVKLEKAAWLWVETVKPEDIKQEHIELAYRINIPACKRGICRRNCKGNPNCLVGIGE
QVWLGEIDENTFHNIDDPNSERREKNIFVGLTNLGATCYVNTFLQVWFHNLELRRSLYQC
QNSRAQEHNIDSDYEPQSICEHLQYLFALLQNSNRKYIDPSGLVKALGLDTGQQQDAQEF
SNLFLSLLEETLSKEKNPNLQNLIQQQFCGQFFYVTICNQCGRSSTLPSRFYELELNIQG
HKNLTECITEFLKEEKLDGENRYFCENCQSKQNATRRIRLHSLPPTLNLQLMRFVFDRQT
GLKKKLNTFINFPEQLDMEPFLEQKLDQKCVYELSAVLIHRGVSAYSGHYIAHVRDALTG
DWYKFNDEEIEKMEGKKLQLGIEEDIAETGKTQSRKPKCSKGYHCSRNAYMLVYKVQEDE
SSNPSRANVEVPSFLQKLVDQDNHKFEEWCMEMAHMRKQSVDKGRAKHEEVKELYDLLPA
KDGDPFEFLPLEWLKKWLDDSTATKEIDNSIFLCSHGKLHPDNMGEIKRVSLEAAKLLYE
RYGGGPRLDGSSLCRDCVSERCRVLRLKKQLDDDYKEISNLVKRATSSDGYWVSKPSLRS
WRQLALEQLEEDEEESKHSNGQTNGQGPHINNKFGMEANMGTEDETKTFNEDIVCTHGAL
SILETERKLVSTEVWTKLREYFPRAPEFTHMQEPCRQCLTLEQEEKDNEAVSKMMALEQK
NQLLNLFHEKNRPVLTKWPQGTDKLYVVPLFFVEEWRKFIRRPTKSSPVSNVGNSLLLCP
HGGFMFTYDSLINGEAQHIALLWPSEWEVISRLFIVDKPIAIHCLRQTESSMTQYTTQPD
LCWECRESFLFQQQRDLREYTQATVYVRKVIEDKTMAKDGAPELNACSSEAEEEKEDLPK
VDGEKDPDFSQAQDAAKRLKLSDSTAAAVAAPAVTNTMKAGSIRRSTRHRKLRGEKALIV
SANQTLKELKIQIMHAFSVAPFDQNLSIDGKSLTDDSATLGSLGVIPECIICLKADEPVT
DYAAMDDAYQVRMPEEGFKGTGLLGH
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcaccccgagtgaaactggagaaagccgcttggctttgggtggaaacagtaaaacca
gaagacattaagcaggaacacatagaattagcatatcggatcaatatcccagcctgcaaa
agaggaatctgcaggaggaattgtaaagggaatcccaactgtcttgttggtattggggaa
caggtgtggctcggtgagattgatgaaaacactttccataatattgacgacccaaattca
gaacgcagagaaaagaacatatttgttggcctgaccaacctgggtgcaacatgttacgtc
aacacattcctgcaagtgtggttccataacctggagctgcggaggagcctttatcagtgc
caaaattcgcgggcgcaggaacacaacattgattctgattatgagccccagtccatatgt
gagcatctacagtacctctttgctctcctgcaaaacagcaacaggaagtacattgacccg
tcagggcttgtcaaagcgctgggtctggatacgggacagcaacaggatgcccaggagttt
tccaatcttttcttgtctctgttggaggagacattgtctaaggagaagaatcccaacttg
caaaatctcatccagcagcagttctgtggacagttcttctatgttacaatatgtaatcag
tgtggaaggtcatcgactttgccgtcgcggttctatgagctggagctgaatattcagggc
cacaaaaacctcactgagtgcatcaccgagttcctcaaggaagagaagttggatggagag
aaccgctacttctgtgaaaactgccagagcaaacagaacgccacccggaggatccgactc
cacagcctgcctccgaccctcaacctgcagctcatgcgctttgtctttgatagacaaaca
ggtctgaagaagaagctcaacactttcataaattttcctgagcagctggacatggaacca
ttcttggaacaaaaactagaccagaaatgtgtctatgagctgagtgcagtgctgatccac
cggggagtcagcgcctactcgggacactacatagctcacgtgagggacgctcttaccgga
gactggtacaaattcaacgatgaggagatcgaaaagatggagggaaagaaactgcagctt
ggcatcgaagaggacattgctgagacgggcaaaacgcagtcgcggaaaccaaaatgcagt
aaaggctaccactgctctagaaacgcctacatgctggtgtataaagttcaggaagacgag
agttcaaatccctcaagggcaaacgttgaggtcccttcattccttcagaagttggttgac
caagataaccataagtttgaagagtggtgcatggagatggctcacatgagaaaacagagt
gtggataagggcagggccaagcatgaagaggtgaaagagctctacgaccttttacctgca
aaagatggagacccctttgagttcctccccctggaatggctgaagaagtggctcgacgat
tcaactgcaaccaaggaaattgacaactccatttttctttgttcccatggaaaactccac
ccagacaatatgggagaaatcaagagggtttctttagaagctgcgaaactcctgtatgag
cgctacggcggtgggccaagactggatggttcctctctgtgcagagactgtgtcagcgag
cgatgcagggtgctgcggctaaaaaaacaactagacgacgactacaaagaaatttcaaat
ctagtaaagcgcgcaaccagcagtgatggctactgggtgagtaagccatctttgcgcagc
tggaggcagttggctttggaacagctggaagaagatgaggaggaaagcaaacacagcaac
ggccagaccaatggccagggaccacacattaacaacaagtttggcatggaggccaacatg
ggaactgaagatgagacgaagactttcaatgaagacatcgtttgcactcatggagcactg
agtatcctggagacggagcggaagctggtatctactgaagtgtggacgaagctgagagaa
tacttccccagagccccagagttcacccacatgcaggagccgtgtcggcagtgtctgacg
ttggagcaggaggaaaaggacaacgaggcggtcagtaagatgatggctcttgagcagaag
aaccagctgctgaacctgttccatgaaaaaaaccggccggttttgaccaaatggccgcag
ggcacagataaactttacgtagtccctctgttttttgtggaagagtggagaaaattcatc
aggagacccactaaatcctctccggtgtcgaatgttggcaactcgctgcttctctgtcct
cacggcggcttcatgttcacctatgactccctgatcaatggagaggcccagcatatagct
ctgctgtggcccagcgaatgggaagtgatcagcagactcttcattgttgacaagccaata
gcaatccactgtttgagacagacggagagctccatgacgcagtataccacccagcctgat
ctgtgctgggaatgcagagagagtttcctgttccaacagcagagggatttgagagagtac
acccaggctacggtctacgtccgcaaagtcatcgaagacaaaacaatggctaaagatggc
gccccagagctgaatgcgtgcagctctgaagcagaagaggagaaggaagaccttccaaag
gtggatggagagaaagacccagacttcagtcaggcccaagacgcagcgaagcgcctaaag
ttgagcgacagcaccgctgccgcggtggctgctcctgcagtcaccaacaccatgaaagcc
gggagcatcagacgaagcacccgccacaggaaactcagaggagagaaagcgctcatcgtt
tcagcgaaccagacactaaaagagctgaaaatccaaattatgcacgccttctctgtggct
ccattcgaccagaacctctctatcgacgggaaaagtctcacggacgactcggccacttta
ggcagcctgggtgttatcccagaatgcatcatctgtttaaaggctgatgaaccagtgaca
gattatgctgccatggatgacgcctatcaagtgagaatgcctgaggagggatttaaaggt
acgggcctccttggtcactga
DBGET
integrated database retrieval system
