Poeciliopsis prolifica (blackstripe livebearer): 129353830
Help
Entry
129353830 CDS
T09758
Name
(RefSeq) laminin subunit beta-3-like isoform X1
KO
K06244
laminin, beta 3
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04382
Cornified envelope formation
pprl04510
Focal adhesion
pprl04512
ECM-receptor interaction
pprl04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129353830
04518 Integrin signaling
129353830
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129353830
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129353830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_I
LAMB1
CCDC39
EGF_2
FTA4
LEKR1
DUF8373
CCDC18_1st
Motif
Other DBs
NCBI-GeneID:
129353830
NCBI-ProteinID:
XP_054879260
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MLGSLTCSTLPLPQESRMRILLLLVAAVAVAAAQNDCSLGACYPPSTDLLLGRSQQLRAS
STCGLTGSEVFCTPYQWRMKCCPCDSRNPNGQLAHTVKEILTTSGPNRWWQSSKGVDPVI
LQFDLNNMFQLDNLMLTFKGPRPNALLIERTLDNGRTWQPALYLAKNCEEAFPGIQTTSP
ISLEQTYCHPLQPHADPYQEETIEFSPLRQYLFAPVSNSQKIEDKAGLTGLRVTLTELGD
VPSYPGRSLSRFFALKEMRVMGTCMCHGHADRCQAQEYKYPGTNTIQVSHVCDCRHNTVG
ENCERCADLYNDLPWRPAEDRNTHTCQRCECNNHAQRCHFDPAVYEASGRRSGGVCEGCM
HHTTGPKCDRCAPGYQPNPRSQMDRPDACIRCACNAEGTVNGGQCEDSAGSCQCKANAEG
PLCDRCKKGFHSLSSSDPLGCKKCSCSPVGSLSVLCDPVTGQCPCRPHFHGPTCDVCSKG
YWKPPQSEVCEPCGCDPTWSTSDTCDQRTGQCQCRRDFGGRTCSQCADGSYGTPLSGCRP
CQCDSAGTLPEVCNRKTGVCLCRAGVTGPRCDSCSRGRCDSFPACELCPDCFFSMDAQRR
NVTLALDKLSLRLPSLPGGGGDLGSLGPRFQELEADLARIRESVSRPPKTVTQLEDAQFL
LNKLRDDLEKVDDDLPPPVRDPALEVELDKLQDLLDSISSMYKEKKDSTGTVVDPDDAGG
LDTIKNAYDKSKDAAKKVNSTETTIKEARDIREEAEDIKDKVQPNNTRDLNQLKNNMTSQ
PDLTPVAKQVCGSTRSEPCTPLQCEGGALCPPEGSPLCQDGTQCVGALPLSKRADADVTD
VKDRLANLSLKITEAAEMLQNAQEKTDKVKQVTKDLSGKTKTARDLLEDEMNKTRDVIQD
LKDFLTDPSSNLTEVQKISEWILNTSLPVSLPDLEKKLEELKNLAANLPNTENVLKEATP
QLDKARKLLQEAEEARVKALEPKENVEKLLESIKAGNDSLADLEKKLQDSLDLIESVNDN
LTQAEDALTPAEKTLTDTEALTAPMKDQLEKLKKLLEEAKQKAPKALQTAGTAEDEANAA
LPILKTLEEQLDRLKDQVGPGAPGETTPLAERVEKLKEKAKTLRNTTLNMTDALEGKADS
LRGLQDEIIQKSTELDGLDTKLKDILQTIRKRAEELRSCSA
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgctcggctctctcacctgttccacacttcctctgccccaggaatccaggatgaggatc
cttttgcttctagttgcggcggtggcggtggctgcagcccagaacgactgctctctggga
gcgtgttacccgccgagcacagacctgcttctgggtcggtctcagcagctccgggcctcc
tccacctgcggcctcaccggctcagaggtcttctgcaccccataccagtggagaatgaaa
tgctgcccttgtgactccaggaacccaaacggtcagctggcccacacagtgaaagaaatc
ctcacgacttctggcccaaaccggtggtggcagtccagtaaaggcgtcgatccagtcatc
cttcagtttgacctcaacaatatgttccagctcgacaacctgatgctcaccttcaagggt
cctcgtcccaacgccctcctcatagagagaactctggacaatggacggacatggcagcct
gcgctctacttggccaaaaactgcgaggaagctttccctgggatccaaaccaccagcccc
atcagtctggagcagacatactgccacccactgcaaccgcatgctgacccataccaggag
gaaacgatcgagttcagcccgttgcgtcagtacctttttgctccagtttccaacagccag
aagattgaagataaggccggtctgaccggcctgcgggtgactctgaccgagctgggcgac
gtgccgtcctacccgggcagatccctcagtaggttctttgccctgaaggagatgagagtg
atgggaacctgcatgtgccacggacatgccgaccgctgccaggcgcaggagtacaaatac
cccggaaccaacaccatccaggtgagccatgtgtgtgactgcagacacaacaccgtcggt
gagaactgcgagcgctgcgccgacctctacaacgacctgccttggagacccgcagaggac
aggaacacgcacacctgccaacgctgtgagtgcaacaaccacgcccagcgctgtcacttc
gacccagcagtgtatgaggccagtgggcggaggagcggcggagtgtgtgagggttgcatg
caccacaccacagggccaaagtgtgaccggtgtgccccgggctaccagccaaacccccgg
agccagatggatcgtcccgatgcatgcatacgctgtgcctgcaatgcggaggggacggtg
aacgggggccagtgtgaagacagcgccggctcctgtcagtgcaaagccaacgcggagggc
cctctctgcgaccgctgcaaaaaaggtttccacagcctgagctcgtcagaccccctggga
tgcaaaaaatgctcctgttctccggtcggctccctgtcggtgctgtgtgaccctgtgacc
ggacagtgtccctgtcgcccccacttccacggcccgacctgcgacgtgtgttcaaaaggc
tactggaagccgccccagtcagaggtctgcgagccgtgtggctgtgacccgacctggtcg
accagtgacacctgtgaccagcggacaggtcagtgtcagtgcagacgagactttggagga
aggacatgcagtcagtgcgcagacggctcgtatggaacccctctgtccggctgccgacct
tgccagtgtgactcagcgggaaccctcccggaagtgtgcaacaggaaaacgggagtgtgt
ttgtgccgagctggggtcaccgggccccgctgcgactcctgcagtcgcgggcgctgtgac
tcgttccctgcctgtgaactgtgtccggactgcttcttcagtatggacgcccagcggagg
aatgtcaccctcgctctggacaagctgtccctcagactgccgtctctccccggaggcggc
ggggacctggggagcctggggccacgctttcaggagcttgaggccgatctcgcccggatc
agggagtccgtatcccgaccgcccaagactgtcacccagctggaagatgctcagttcctg
ctcaacaaactgagggacgacttggaaaaggtggacgacgatcttcctcctccggtcaga
gatcctgctttggaagtggagctggataaactgcaggatctactggatagcatctcttca
atgtacaaagaaaagaaagattccacggggaccgtcgtcgaccccgacgatgcaggaggt
cttgataccatcaagaatgcgtatgataagtcaaaagatgcggccaagaaagtgaattcg
actgagaccacaataaaggaggcgagagacatccgagaggaggcggaggacatcaaggat
aaagtgcagccaaacaacaccagagacctgaaccagctgaaaaacaacatgacctcccag
ccagacctcactcctgtagcgaagcaggtgtgtggcagcactcggtccgagccctgcacc
cctctgcagtgtgagggcggcgctctgtgtccgccggagggaagcccgctctgccaggac
gggacgcagtgcgtcggcgcgctgcctttgagcaaacgggccgacgccgacgttacggat
gtgaaggaccgtctggccaacctgagtctgaagatcacagaggctgcagagatgcttcag
aacgcacaggaaaaaacagacaaggtgaagcaagtaacaaaagacctgtcaggcaaaact
aagacagccagagatctgctggaggatgaaatgaacaagacccgcgacgtaattcaagac
ctcaaggactttctgacggatccgtcttccaacctgaccgaagttcagaagataagcgag
tggattctgaacaccagcctgccggtcagcctgcccgacctggagaagaagctggaggag
ctgaaaaatctggctgcaaatctgccgaacaccgagaacgttctgaaggaggccacgccc
cagctggacaaagccaggaagctgctgcaggaggcggaggaggccagggtcaaggctctg
gaacccaaagaaaatgtggaaaaactcctggaaagcataaaagcagggaacgactccctc
gccgacttggaaaaaaagctgcaggacagtttggacctgatcgaaagcgtcaatgacaac
ctgacgcaggcagaagacgcgctgactccagcagagaagacgctgaccgacacagaagca
ctgacggcaccgatgaaggaccagttggagaagctgaagaagctgttggaggaagcaaag
cagaaagctcccaaagctctgcagactgcagggacagctgaggacgaggcaaatgcagct
ctaccgattctgaagactttggaggagcagcttgatcgtcttaaagaccaggtgggcccc
ggagctcctggagagacgactcctctggcagagagagtggagaagctgaaggagaaagct
aaaactctgaggaacacgacgctcaatatgacagatgctcttgaaggaaaagcagactcc
ctgagaggcctgcaggacgagatcatccagaagtctaccgagcttgatggactcgacacc
aagctgaaggacatcttgcaaacgatccgaaaaagagccgaagaactgcgctcctgttcg
gcctaa
DBGET
integrated database retrieval system
