Poeciliopsis prolifica (blackstripe livebearer): 129353860
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Entry
129353860 CDS
T09758
Symbol
pcdh18b
Name
(RefSeq) protocadherin-18b isoform X1
KO
K16499
protocadherin delta 2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129353860 (pcdh18b)
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Protocadherins
129353860 (pcdh18b)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
PAG
Motif
Other DBs
NCBI-GeneID:
129353860
NCBI-ProteinID:
XP_054879304
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MGPNMIQAKGNVHSTVPLALLLLLVALLQGSTGKTLKYKVYEEQRVGTVIARLKDDVAGV
LSKLPNSLSFRFRAMQRGSTQLLSVREEDGEISIGTKIDREKLCEKNLNCSIEFDVVTLP
TEYLQLFHVEVEVLDINDNSPHFSRAIVPIEISESASVGTRIPLDGAVDADVGENSLHTY
SLTPNNFFKIDVRTRTDGAKYAELVVMRELDREVQSSYQLQLTASDNGVPPKSGSTLLKI
SISDSNDNSPAFDEQAYVINLLENSPLGTLIIDLNATDPDEGTNGKIVYSFSSHVSPKIL
ETFKINPENGHITLIKKVDYETTASYELDVQAQDLGPNSIPGLCKIVVKVVDVNDNKPEI
NINLMSPGKEEVAYISEGAPVDTFIALVRVDDMDAGLNGEVVCRLHGHGHFRLQKTHEKN
YMILTNVSLDREKRSEYSLTVMAEDKGSPSLSTIKHFTVQVLDENDNPPHFEKSRYEVFK
SENNSPGAYLMTVVASDPDLGTNGQVTYTIIDAVIQASPITTYVTIDPSNGAIYALRSFD
HEDVSRVAFTVQARDSGNPALSTNTTVLLTVMDENDNPPIIHSPSLRNHTAELPVWKYAS
PGQLISTLKITDRDSGANGEVSCSIVGGNEDGLFVMDARRCELRTNASLEQAPRDVMEIS
IEVQDRGTSRLTTGALFRLFLQENMDILPPLYPTGSSQASLDLSLIVIISLGGVCALLLI
VMVMFATARCSREKKDPRHNYNCRVAENSYQNHPKKPARQIHKADITLVPTVNGTLPVRS
HPRSPLPSPTPERGTLVSRHSHHSRQSLNSLVTISSNHVAENFALELAHATPPVEQVSQL
LSMLHQGQYQPRPSFRGNKYTRSYRYALNEMDKFSLKDSGRGDSEAGDSDYEPGRESPID
RLLGEAFTELYSPDGQHCSHAAMKLCTEECRVLGHSDQCWMPPLGCPASSSADYRSNLYI
PGEEAHQATDITQEQVPQPCTDTCTARNQSFSTFGKDLGGEDGAEEDGLEGGSKSTDEDL
CGTTSLLSEMSSVFQRLLPQGLDSYVQVNENQKGTSLSGVGVPMTGSLDRRRGHLPGKPS
PSVYQQGVAAWAANTHFQNPGSSIGPSGQHQGGSYHTLKANTKLSCQSSNNKGSQAPKNS
PQNSGHSPKPTSNPLLTGLVSPTLVQTSLTQPPVQAMLNGPSSKWLPAMEEIPENYEEDD
FDSVLSHLQGKRSDSRHELVDASELVAEINKLLQDVRQT
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggggccaaacatgattcaagccaaaggaaatgtccactccacggttccactggcgctg
ctgctgcttctggtggctcttctccaaggttccaccggtaagactctgaaatacaaagtt
tacgaggagcagagagtggggacagttattgcacggctaaaggacgatgttgccggggtt
ttgtccaaactcccgaattccctgagctttcggttccgcgcgatgcagcggggcagcacg
caattactgtccgtccgggaggaggacggggagatcagcattggcaccaaaatcgatcgt
gagaagctttgcgaaaaaaacttaaactgctcaatcgaatttgacgtggtcacgctgccc
acggagtacctgcagctgtttcacgtggaggtggaggtgctggacattaacgacaattcc
ccgcacttctcccgcgccatagtccccatcgagatttcagagagcgcatctgttgggacg
cgcatcccgctggacggcgcagtggacgcagacgtcggagaaaactccctgcacacctat
tctctgacgcccaacaacttcttcaaaatagatgtgaggaccaggacggacggcgccaag
tacgcagaattggtggtgatgagggaactggaccgtgaggtacagtccagctaccagctg
cagctcactgcttcagataatggcgtgccccccaaatcaggatccactttactcaagata
agcatctcagattccaacgacaacagcccagcgtttgatgagcaagcttatgtcatcaat
ttgctggaaaactctcctcttgggactctgatcattgacttaaacgctacagatccagat
gagggtacaaatgggaaaatagtttactctttcagcagccacgtttcaccaaagattttg
gaaacatttaaaataaatccagaaaatggacatatcactctcatcaagaaagtggactat
gaaaccactgcttcctatgagctggatgtccaagcccaggacctgggtcctaattcgata
cctggactttgcaaaattgtggtgaaagtagttgatgtgaatgacaacaaaccagagata
aacatcaatctgatgtctccaggcaaagaggaggttgcctacatttcagagggggcacct
gtggacacattcatagctctggtacgtgttgatgatatggatgctggcctcaacggggaa
gtggtgtgcaggctgcatggtcatggacacttcaggctccagaagacccatgagaagaac
tacatgatcttaaccaatgtgtcgttggacagggagaagaggtcagagtacagcttgact
gtcatggctgaagacaaggggtcccccagcctttctaccatcaaacatttcactgttcag
gtgctggatgaaaatgataaccccccacattttgagaaaagtcgctatgaggtttttaaa
tctgaaaataactcacctggagcctacttaatgactgtggtggcctcagatccagatctg
ggcaccaatggtcaggtcacatacaccattatagatgctgtgatccaagcgagccccatt
actacctacgttaccattgatccttccaatggggccatctacgccttacgcagctttgat
catgaggacgtcagccgtgttgccttcactgtccaagctcgtgacagtgggaaccctgca
ctgtcaaccaacaccactgttctcctcaccgttatggatgaaaatgacaacccacccatc
atccactcaccttctctccggaaccacacagctgaacttccagtgtggaagtatgcatca
cctggtcagctgatcagtactctgaaaatcacagaccgggactctggtgctaatggagag
gtgagctgttccattgttgggggtaatgaagacgggttgtttgtgatggatgcccggcgg
tgtgagctcagaactaatgccagcctggagcaggccccacgggatgtgatggagattagt
attgaggtacaggacagaggaactagtcggctaaccacaggagccctctttaggctcttt
ctgcaggagaacatggacatcctccctcctctttatcccactggatccagccaggcctcg
ctggatctctctctcattgtcatcatttctctcggtggtgtctgtgctctgctgctcatc
gtgatggtgatgtttgcaacggcccgctgcagccgtgagaaaaaagaccccaggcacaac
tataattgtcgtgtggctgagaacagttaccagaaccaccctaagaagcctgccaggcag
atccacaaggcagacattactttggtgcccactgtcaacggaaccttacctgttcggtct
cacccacgatctcccttaccttccccaactcctgagagaggcactctggtgagcagacat
agccatcatagtcggcagtctctcaacagcctagtgactatatcttccaatcacgtggct
gagaactttgccttggagctagcccatgccacacctcctgttgagcaagtctcacagctt
ctgtccatgctccatcagggccagtaccagccacgaccaagtttcagaggcaacaaatac
actaggagctacagatatgctctcaatgagatggataagttcagtctgaaggacagcggt
cgtggagacagtgaagctggtgacagtgactacgaacctggaagggagtcacccatcgac
aggctccttggtgaggcctttactgagctatattcccctgatggccagcactgttcgcat
gcagctatgaagctctgcacagaggagtgccgagttctgggccattccgatcagtgctgg
atgcccccactgggctgccctgcttcttcctctgctgactaccgtagcaatctctacatt
cctggggaggaagctcatcaggccactgacatcactcaggaacaggtcccccagccttgc
actgacacctgcactgctcgcaatcagagcttttccacttttggcaaagacctaggtggg
gaagatggtgcagaagaggatgggctggaggggggctccaagtctacagacgaagacctg
tgtgggaccacctcactgctgtcggagatgagcagcgtgttccagaggttgctaccgcag
ggtctggattcttatgtccaggtcaatgagaaccagaaggggactagcttgagtggtgtt
ggcgttcccatgacgggatctttagaccgtcggaggggtcatctacctggaaagcccagc
ccctcagtttaccagcagggtgtagcagcctgggctgccaatactcacttccaaaatcca
ggaagtagcatcggcccatctgggcagcatcagggtggcagctatcacaccctcaaagcc
aacactaagctcagctgccaaagcagcaacaataaaggatcacaggcacctaaaaacagc
ccccaaaacagcggccacagcccgaaacccaccagcaaccccctcctgaccggactggtc
agcccaacactggtgcagacttctttgacccagcccccagtacaagccatgctcaatggg
ccctcttcaaaatggcttccagccatggaggagatcccagagaactatgaggaggatgat
tttgactcggtgctcagccaccttcagggcaagcgcagtgacagccggcatgagctggtg
gacgccagcgagctggtggctgagatcaacaaactcttacaggatgtccggcagacataa
DBGET
integrated database retrieval system
