Poeciliopsis prolifica (blackstripe livebearer): 129354016
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Entry
129354016 CDS
T09758
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129354016
Transcription factors [BR:
pprl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129354016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
129354016
NCBI-ProteinID:
XP_054879474
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MFFFSFRCGSTMKSGGRGKVQPVEEVIGKRPKRKCLQWHPLLSKKASEFSEEEEEEDEEE
LGKAGLCSEDQDSQVHNVSTTEEAEEDSNEHRARRPMNAFLLFCKRHRSLVRQEHPRLDN
RGATKILADWWAVLEPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTSKPLKSSSYQHVSC
SRKKVWSFSCNSPKDSTAKNVPKNDSLHQLNFAMADPTKMGGLSMLLLAGEHALTNREIS
PSTKSTLPDIAIKGSSFSEETKEMLSQTIPNRVPDIDSRMKTGLSLLEESSLSGTPEGKP
YRQSALFQLAEMCLASEAGKIDSIVSQPNDNCFTATLKQISRKPGVKEERDNSDCRSSPD
RSPSPLSPSSGTSTPTAQHSSQSGCVKKKYKKYEEVKCNNIPFSEKRVGVNCQHFESNVD
RTIEAVARGAWIDKEDKCKKKTPASLISRTSSLPQRKTKTKVKILVKTKEEELEDSSKLQ
GSSDGERKKVVPGIETKIEAESVTSERTGLQGCMIEPPQLHCDQSPVKPKEEDKEKHKEK
EQQKASDTTCELNTHNHGSRKSERSCKGALYKTLVSEGMLTSLRANIDRGKRGGLRAFDH
DSNWSQDSWSVSHLGPSNTKKLKKSKSKEESSQSLGKLEEEFEKKFNSLPQYSPLTFDKK
GTAVAKKKKTDCSSSVDEPSKAPKVEQNNCWQLDSVSKVQPSASMFPDIHSASSMEMLVG
SQKRKARKSRITHLVRTADGSVSAADENKARNLNQGQDKKPLNQPNLCNEKQCYSSPTAE
ETGLNPLPQELPAFFSLAALAEVAAMENVHRGQRSLAQSQKKELAQTPVLISCADQ
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcttttcctttaggtgcggtagtaccatgaagagtggaggaagaggtaaggta
cagcctgttgaggaggtcattggcaaaagacctaaacgtaaatgcctgcagtggcaccct
cttctttccaagaaggcttcagagttttctgaggaagaggaagaagaagatgaggaggag
ctggggaaggcagggctgtgcagtgaggatcaggactcccaagtgcataatgtaagcaca
acagaggaagctgaagaagactctaatgaacaccgggcacgtcggcctatgaatgctttc
ctcctcttttgcaagcggcaccgttctctggtccgacaggaacatcctcgtcttgacaac
cgtggggccacaaaaatattggctgactggtgggctgtgctggagcccaaggagaagcag
aaatacactgatatggccaaggagtataaagatgcatttatgaaggcaaacccaggctac
aagtggtgtcccaccacaagcaagccactcaagagctcttcctatcagcatgtcagctgt
tctcgcaaaaaggtgtggtccttctcctgcaactcacccaaggattctactgccaaaaat
gtgcccaaaaacgacagtttgcaccagttgaactttgccatggcagaccccacaaagatg
ggaggcctgagcatgctgctgttagctggtgaacacgccctcacaaacagggagatctct
cccagcactaaatctacattacctgacatagccattaaaggaagctccttttcagaggaa
actaaagagatgttgtctcaaacaattcccaacagagtgcctgatattgacagcaggatg
aagacagggctttccctgttggaagagtcttccttgtcaggcacccctgaaggaaaacca
tacagacagtcagctctcttccagcttgcagagatgtgtttggcatcagaagcaggaaaa
atagactcaatagtgtctcagcccaatgacaactgcttcacagcaacactcaagcaaata
tccaggaagccaggagttaaggaggagagagacaactctgactgccgtagttctcctgat
agatcaccttcccctctgtctccttcctctggaacatccacccccactgctcagcattca
agccaaagtggatgtgtcaaaaaaaagtacaagaaatatgaggaagtgaagtgcaacaac
atcccattttcagaaaagagagtgggcgtgaattgtcagcactttgaatccaatgtggac
aggaccattgaggcagtagccagaggagcctggattgacaaagaggataaatgcaagaag
aagacccctgccagtctaatcagtagaacctctagtctgccacaaaggaaaactaagacc
aaagttaagatactggttaaaacgaaagaagaggagttggaagacagcagcaagctgcag
ggatcttctgatggggaaagaaagaaagtagtgcctggcattgagaccaagattgaagca
gaaagtgtaactagtgaaagaacaggccttcaaggctgcatgatagagcctccccagctc
cactgcgaccaatcgccggtgaagcccaaagaagaggacaaggagaagcacaaggagaaa
gaacagcagaaggctagtgacacaacctgtgagctgaacacacacaaccatggctccaga
aaatctgagcgaagctgtaagggggccttgtacaaaactcttgtgtctgagggaatgcta
acttcactgagagccaatatagacagaggtaaacgaggtggtttacgcgcttttgatcat
gattctaactggagtcaggacagctggtcagtttcacacttgggaccaagtaataccaag
aagctaaaaaagtccaagtccaaagaagagtcttcacagagcctgggaaaactagaagaa
gagtttgaaaagaagttcaacagcctgccacagtacagtccactcacctttgataagaaa
gggacagctgttgccaagaaaaagaaaactgactgctcctctagcgtagatgaaccctct
aaagctccaaaagtggaacagaataactgctggcaattggattcagtttcaaaagttcag
ccctctgcttccatgttccctgacatccatagtgcctccagcatggagatgctggttggc
agccagaagaggaaggctcggaagtccagaattacacacttggtgcgcacggccgatggc
agtgtttctgcagctgatgaaaacaaagctaggaatctaaaccagggacaggataagaag
ccattaaaccaaccgaatttatgcaatgaaaaacagtgctacagcagtcccacagcagag
gaaactgggctaaaccccttaccacaagagttacctgctttcttcagtttggcagccctt
gctgaggtagcagccatggaaaatgttcacagaggccagagaagcttagctcaaagccag
aagaaagaacttgcacaaactccagttctcatatcctgcgctgatcagtga
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