Poeciliopsis prolifica (blackstripe livebearer): 129354020
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Entry
129354020 CDS
T09758
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04140
Autophagy - animal
pprl04148
Efferocytosis
pprl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129354020 (vps11)
04148 Efferocytosis
129354020 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129354020 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129354020 (vps11)
Membrane trafficking [BR:
pprl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129354020 (vps11)
Hops complex
129354020 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-rbx1
zf-C3H2C3
zf-RING_2
TSGP1
zf-C3HC4
zf-RING_5
TPR_GEMI5
zf-ANAPC11
WD40_Prp19
Beta-prop_EML_2
zf-RING-like
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
129354020
NCBI-ProteinID:
XP_054879479
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MAAFLQWRKFVFFDKDTVKDPADSGKTFILPKGISASDSGRGHVVLGDMEGQIWLMTRSL
QLTSFQAYKLRVTHLFQLKQHSIMVSVGQDEHGINPLVKVWNLDKRDSGNPLCTRIFPAV
PGNKPAEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGSCPVTGLAFR
QMAKVTHLFVATLEQVFCYTLSNKEYPKVELDTHGCALYCSSLADPSQDSQFIVAGDECV
YLYQPDERGPCFAFDGHKLLTHWHRGYLFLLIKDVKSPNKSGFGRGENSLSEKQVLTIYD
LDNKFIAYSASFDDVIDVLAEWGFFYILTRDGKMFVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTTGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLRQA
GYHSHAVFLAERHQHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQTESNMKRYGKTLMHHV
PEGTTLLLKRLCTNYHPSENSMEKVSLDSSLLNKVQANSEEFIPVFANNPRELKAFLEHM
IEVDPRSSQGVYDTLLELRLQDWAHEQDPEKKKVCQGEALSLLRSDNTVFDKALVLCQMH
NFKEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVDACKRYGDQEGCLWEQALGYFARKEED
CKAYVSEVLHHIDQKNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKI
CQYREETFHLRSEIQELKASAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAES
DAECPTCTPENRKVMDLLRAQDQKRDLHDHFNRQLRSSNDGFSVVADYFGRGVFNKLTLV
TDPPGSKTVGSLEVNLQRDLLIHTKRNC
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatttctacagtggagaaaatttgtcttctttgataaggacacggtgaaggat
cctgcagatagcgggaaaacctttattcttcctaaaggaatctcggcgagtgactccgga
cggggtcatgttgttctgggagatatggaaggacagatctggctgatgacacgctctctg
cagttgacgtcattccaggcatacaagctgcgggtgactcacttgttccagctgaaacag
cacagtatcatggtatcagtgggacaggatgaacatggcattaatcctctggtgaaggtc
tggaaccttgacaagagagacagtggaaatccactctgcaccagaatctttcctgcagtt
cccggcaataaaccagctgaagtgtcttgtctcagtgtccacgagaacctgaacttcatg
gctataggcttcacagatggcagtgtggttttaaccaaaggggacatcaccagagaccgt
cacagtaaaactctgactctgcatgaggggagctgccctgtcacaggcctggccttccgc
caaatggcaaaagttacacatttgtttgttgccactctggaacaagtcttttgctacact
ctgtctaacaaggaatatccgaaagtagagctggacacccatggctgcgccctgtactgc
tcatccctggcagatccgtcccaggattcccagttcattgtggctggggatgaatgtgtt
tacctgtaccagcctgatgagcgagggccctgctttgctttcgatggccacaagctgttg
acccattggcaccggggatacttgttcctgctgatcaaagatgtgaagtcacccaataaa
tcagggtttggcaggggcgagaactcactgtcagaaaagcaagttttaacaatctatgac
ctggacaacaaattcatcgcctacagcgcctcattcgatgatgtcattgatgtgttggca
gaatggggattcttctacattctgacccgagacgggaaaatgtttgttctgcaagagaag
gacacacagacaaaactggagatgctgttcaagaagaacttgtttgttatggctataaac
ttggctaaaagccagcatctggacagtgacggtttgtcagagatctttcgacagtatggc
gatcatctgtacctgaagggagatcatgatggtgccatccagcagtatattcgcaccact
gggaagttggagccttcgtatgtcattagaaaattcctggatgcccaaaggatccacaac
ctgacggcatacctgcaggcccttcatcgccagtctctggccaatgcagaccacactaca
ctgctcctcaactgctacaccaaactcaaagacagctccaagctggaagagttcatcaag
agcagcgagagtgaggtccactttgatgttgagattgccatcaaggttcttcgccaagct
ggataccacagtcatgctgtgttcctggctgaacgccaccagcatcatgagtggtacctg
aagatccagctggaggacctgaagaactatcaggaaggtttgcggtacattggtcgtctg
ccttttgaacaaactgaaagcaacatgaagcgctatggcaagacgctcatgcaccatgtt
cctgaaggcaccacattgctcctgaagcgcttatgcaccaactatcatccaagtgaaaac
tcaatggaaaaagtcagcctggacagtagtctgcttaacaaggtccaggcaaattctgaa
gaattcattccagtttttgccaataatcctcgtgagctgaaagccttcctggaacatatg
attgaggtggaccctcgttcatcccagggtgtgtatgacacactgctggagctccgactg
caagactgggcacacgaacaagaccccgagaaaaaaaaggtctgccaaggagaagccctt
tcgctgctcagaagtgacaatactgtgtttgataaggccttggtcctttgccagatgcac
aactttaaagaaggtgtcctctacctgtacgagaaaggcaaactttaccagcaaatcatg
cattaccacatgcagaatgaggagtatggaaaagttgtagatgcctgcaaacgttatggt
gaccaggagggctgcctttgggagcaagctctcggatactttgccagaaaagaggaggac
tgtaaggcctatgtcagtgaggtcctccatcatattgaccagaagaacctcatgcctcca
ttacttgtcgtgcagacactggcacacaactcaacggccactctgtcggtaatcaaagac
tacctcattaataagctgcagagagagagccagcaaatagaagatgacgagcgtaaaatt
tgccagtaccgtgaggaaacttttcatcttcgctctgaaatccaggaactgaaggcaagt
gccaagatattccagaagacaaagtgcaacatgtgtaacagccccttggagcttccatct
gtacacttcctgtgtagccactcctttcaccagcactgctttgaaagttatgcagagagc
gatgcagagtgtccaacctgcactccagaaaaccgcaaagtcatggatctgctgcgcgct
caagaccagaaacgggatctccatgaccattttaatcgacagctccgaagctccaatgat
ggtttctctgtggtggctgattattttggtcgaggagtgtttaacaaactgacgctggtc
actgaccctccagggagcaaaactgttggaagtctagaagtcaacctgcagcgagacctg
ctgatccacacaaagagaaactgctag
DBGET
integrated database retrieval system
