Poeciliopsis prolifica (blackstripe livebearer): 129354028
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Entry
129354028 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129354028
Membrane trafficking [BR:
pprl04131
]
Protein recycling
Others
Others
129354028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
APC1_3rd
Motif
Other DBs
NCBI-GeneID:
129354028
NCBI-ProteinID:
XP_054879485
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All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MQLLPLRXGLHFIKSFNLDHFGSVALWTPPHLAPAPQLAAFVSPPHRAQNLPDRQEDSQH
PLHPVLPPAMETEVRFCPKWHGALRFGLFLLLSGLLGVAEAEITCRSCRDGNMWYGAQEL
LLRVETSGPAAGPVGEVLGSGDRTGRVPCEPGPAGCAPDRRQPKRERITGSGKVSQHRDG
VGSTPRRSRRDSGGDAVSSAPAEGAAAAAAAAGRRAARWSGKERRAAGARQEELKLNSST
FALTGDSSHNQAMVHWSGHNSSVILMLTKLFDFNLNSVTESSLWRSTDYGATYQKLNDKV
GAKTILSYLYVSPNNKRKIMLLTDPEIESSLLISSDEGATYQKYRLNFYILSLLFHPEQE
DWILAYSHDQKLYSSVEFGRRWQLVHEKVAPNRFYWSKMGLDKEPGLIHLETSISEGQAL
YVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQVSTAGRPVYYVSAKRDVFTPMKL
PKYTLPKELHVISTDENRVVAAVQEWNQNETYNLYVSDTSGVYYTLALENVVSSMGLEGN
VMVDLYEVAGIKGMFLANKKTDNQIKTYITFNRGRDWRLLQAPSRDLRSNSIHCVLPYCS
LHLHLHVSANPYTSGNIASRESAPGIIVASGSIGSELTTSNVSAFITSDAGNTWRQIFDE
EYAVLYLDQGGALVAIRHTPLPIRHLWLSFDEGRQWSKYSFSNTPLFVDGVLGEPGEETL
IMTIFGHFSHRSEWQLVKIDFRSIFNRRCTEADYQTWHLHNQGEPCLMGVKRIYRKLKPT
SRCVMGKTYSVAMTSAPCDCTEADFECDYGFERRTDGKCSPAFWFHPSSMSRSCTTGMTF
LNSTGYRKVVSNNCTAGVIAEYTARQQPCPVQAPKGLHLVTSEGRLAATLGANVTFLVFL
EEGDGARTSITLDFGDGHALTYSNVSSIEDGIKHIYKSVGIYRVTATGENSLGSETATLF
LHVTCQLEHIHLSAPFVAVRNKEVNLTAVLHPSQVGTVTYIWWIGNNTEPVITLEGSVAC
TFSREGINTVTLQVSAGSTILQDRKTIAVHEYFRSHLLAFSSNLDEHNPDVAEWRQDVSR
VIRNALIQATGVREDLLLVTVLPGLPTAAEFFLLPDKQLTEGKAEKSSAHLDQLSDLLLN
ALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVAGLAVFVIYKF
KRKIPGFNVYAQMQNDKEPEMMSPANPSEATPSSPQDLVPSLEILDTELNSRPIGCVKPH
VHVKFSTELPTYIV
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcctccctctgcgcnnggggcttcatttcatcaaatccttcaacttggaccac
ttcggctcagtcgcactttggactccaccgcatttggctccagcgccgcaacttgcagca
tttgtttctcctccacatcgagctcagaacctcccggacaggcaggaagactcccagcat
ccgctgcatcctgttctgcccccagcgatggagacggaggtcaggttctgcccaaagtgg
cacggcgcgctccggttcgggctcttcctcctcctgtccggcttgctaggcgtcgccgaa
gctgagataacctgcaggtcatgccgggacgggaatatgtggtacggcgcgcaggaatta
ctgctgagggtggaaacaagtggtcccgctgccgggccagtgggggaagttttggggagc
ggagaccggaccgggagggtcccctgcgagccgggccccgcaggatgcgctccagaccgg
aggcagccgaagcgggagcggattacaggcagcgggaaagtttcccaacacagggacggt
gttggttcgactccacggcgctccaggagggacagcggcggggatgcagtcagctcagcc
ccggcagagggagcggcggcggcggcagcggcggccgggcgcagagcggcgcgctggagc
ggcaaggagcgcagagcggcgggcgcgcggcaggaggagttaaagctcaacagctccacg
ttcgccctgaccggagactcatcccacaaccaggccatggtgcactggtccggccacaac
agcagcgtgattctgatgctaaccaaactctttgacttcaacctcaacagtgtgactgag
agttcattatggaggtcaactgactatggtgcaacataccagaagctgaacgacaaagtg
ggagcgaagacgatcctcagctacctgtatgtgagccccaacaacaagaggaagatcatg
ctgctgacggacccggagatagagagcagccttctgatcagctctgatgaaggagccaca
taccagaagtaccgactgaacttctacatcctgagcctcctgtttcaccccgaacaggag
gactggatcctggcgtacagccacgaccaaaagctctacagttctgttgagtttggaaga
cgatggcagctggtgcacgagaaagtggctcctaatcgtttctactggtccaagatgggt
ttggacaaagagccgggcttaattcacctggaaaccagcatctctgaaggacaggcgctg
tacgtcacctgcaagctgcagaactgcacagacgccaacaagggcaaaccgttccccgga
tacattgaccccaattccctggtggtgcaggatgagtatgtgtttgtccaggtgtccact
gcagggaggccggtctactacgtttctgcaaaacgagacgtctttaccccgatgaagctg
ccaaagtacaccctgcccaaggagctgcatgtgatcagtacagatgaaaaccgcgtggtg
gctgctgtgcaggagtggaaccagaatgaaacctacaacctgtacgtgtcggacacttcg
ggcgtctactacactctggctctggagaatgtggtcagcagcatgggcctggagggcaac
gtcatggtggacctctacgaggtggcaggaataaagggcatgttcctcgccaacaaaaag
acggataaccaaataaagacgtacatcacttttaaccgcggcagagactggaggttgctg
caggctccgagcagagacctgagaagcaacagcatccactgcgttctgccatactgctca
ttacatctccatctccacgtgtctgccaacccctacacatctggaaacatcgccagcagg
gagtcggcgccggggatcatcgtcgcctcaggctccatcggttcagaactgaccaccagc
aatgtgagtgcgttcatcacctctgatgcaggaaacacgtggagacagatctttgatgaa
gagtacgccgtgctttatctcgaccaaggtggagccttggtggcaataagacacactcca
cttcccatccgacacctatggttgagcttcgatgaaggacggcagtggagcaagtacagc
ttctccaacacgcctctgtttgtggacggggtgctgggcgagccgggcgaggagacgctc
atcatgacgatctttgggcacttcagtcatcgctctgagtggcagctggtgaaaatagac
ttcaggtccatcttcaacaggagatgcacggaggcggactaccagacgtggcacctgcac
aaccagggcgagccgtgtctgatgggcgtgaagagaatctaccggaagctgaagccgacc
tccaggtgcgtcatgggaaagacgtactccgtggcgatgacctcggctccctgcgactgc
acggaggcggacttcgagtgcgattatggctttgagaggcggactgatgggaagtgcagc
ccggccttctggttccatccgtcctccatgtcccgcagctgcaccaccggaatgactttc
ctcaacagcaccggctacaggaaggtggtgtccaataactgcacagctggagtgatagca
gagtacacggcccggcagcagccctgccccgtccaggctcccaaaggcctccacctggtc
accagcgagggccggctggccgccacgctgggcgccaacgtcaccttcctggttttcctg
gaggagggagacggagcgaggaccagcatcacgctggactttggagatggtcacgctctg
acctactccaacgtgagctccatcgaggacggcatcaagcacatctacaaatccgtggga
atctaccgggtgacggccaccggggagaacagcctcggttctgagaccgccacgctcttc
ctgcacgtcacatgtcagctggagcatatccatctctctgctccctttgtggccgtgagg
aacaaggaagtgaacctgaccgccgttctgcatcccagccaagtgggaacggtcacctac
atctggtggatcggaaataacacggagcctgttatcaccctggagggaagcgtggcgtgc
acgttctccagggaggggatcaatactgtcacgttgcaggtgtctgctgggagcaccatc
ctgcaggacaggaaaactatcgctgtccacgaatatttccgatcccacctgctggccttc
tcctccaacctggacgaacacaacccggacgtggctgagtggcggcaggatgtgagccgg
gtgatccggaacgctctgatccaggcgacaggcgtacgggaggacctgctcctggtcacc
gtcctgccaggtttaccaacagcagccgagtttttcctgctgcctgacaagcagctcacc
gaggggaaagcagagaagagctcggctcatttagatcagctctctgacctcctgctgaac
gccttgaatcagaacctggtccagttcacgctgcggccgggggtccaggtcaccgtgtac
gccgctcacctgtcggcagcgcccctggtggacaccagcgagaaccacagtggctctgcc
atgctaatgctgctctctgtagtggttgcgggtttagctgtgtttgtcatctacaaattt
aagaggaagatcccaggcttcaacgtctatgcgcagatgcagaacgacaaagagccagaa
atgatgagtccagccaatccctcagaggccacgcccagctcaccgcaggacttggttcct
tctctggagattctggacaccgagttgaactcgcggcccatcggatgtgtgaaacctcat
gtacatgtgaaattctccacagaactccccacatacatcgtctga
DBGET
integrated database retrieval system
