Poeciliopsis prolifica (blackstripe livebearer): 129354055
Help
Entry
129354055 CDS
T09758
Name
(RefSeq) aggrecan core protein-like
KO
K06792
aggrecan 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pprl00535
]
129354055
00536 Glycosaminoglycan binding proteins [BR:
pprl00536
]
129354055
04091 Lectins [BR:
pprl04091
]
129354055
Proteoglycans [BR:
pprl00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
129354055
Glycosaminoglycan binding proteins [BR:
pprl00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
129354055
Lectins [BR:
pprl04091
]
C-Type lectins
Lecticans
129354055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
hEGF
Izumo-Ig
ig
Glutenin_hmw
Ig_3
I-set
Motif
Other DBs
NCBI-GeneID:
129354055
NCBI-ProteinID:
XP_054879507
LinkDB
All DBs
Position
Unknown
AA seq
1459 aa
AA seq
DB search
MLKWTVILSLCLNVSSATFDYLYEQRSFMDPEDILTVSIPLEGLQRPLLGETLLLPCYFQ
DHSAEDSASFSHRIKWSYVTKEKATTILVALERQVRISESYLDRVQLRSYPQTPTDASIT
ISALRSSDTGVYRCEVQTGIEDAYDIVHVLVQGIVFHYRPFMGRYTLSFEKAKAACAQNS
AVIASPEQLQAAFEDGFHQCDAGWLSDQTVRYPIHESRINCYGDKEELPGVRTYGMRDLN
ETYDVYCFADRMPGRVFHSTFAGKFTFSEAALACSYQGARLATTGQLYLAWQGGMDVCNA
GWLRDGSVRYPINIRRPQCGGGLLGVRTVYLHTNQTGYPLPGSRYDAFCYTDSPDDEGSG
ADEGSGVVIITTVTKRPEMFFSKTTTESEAVGEVETQQPFDLSFTNSQKPNKLPLPQPTN
FTDFTFDLIEAVTNQPALQKEPNKTSVISPAGVVFHYRSPAGRYALTFVEAQLACQGVRG
SMATPQQLQQAYEDGYHQCDAGWLLDQTVRYPIVFPREKCAGDLGDQPGVRTYGLRPAEE
RYDVYCYTEEVKGEVFHVGSAEGFTYDEAASACENHSAVLASTGELYAAWKRGLDKCRAG
WLLDRSVRYPVNSPRPGCGGETSGVHTLYSPPNQTHYPEPDARFDAYCIRVGFLSNETEL
NITDIQKAPPNQTLDTEILRPYGFFIVPPIPVEISGSGSGSADFDSGSAVDNSGVQFNSG
DRVTSGDQSGSGDQPGSGDRVNSGDQSGFGDQVNSGDQSSSGDQPSSGDQSGSGDQSGSG
DQSGSGDQVTFGDISGSGGKIPIGDQDGYTDTVVSSGGSGLASASGSGSGLRVVFSGPDI
EAVEGSTSGEPQEAGEGNTDVLIFPLSAADSGELSGSGDKSESGSGSDFIEKDAGHLSGM
GHILDQELSGFIGSLSGSGRSGDISGSGDAPILRIDDKLIDAKKEYNLDGGPLDFSGSGI
LSGSTSESDSESLTGVTFMGSGFTKLIGSHSGEQEEATGDLFYSSGPESGGQMSGFRISS
CSFESRAGVSGSGFSTSETSTTKGEEEGSAAFFTQGLMIEIPGNDKVPLELGENSVEYSG
EASGNNGFYSGDGNKDLADDNTFMSGVSSSGDSSDPLVVVPPAPSVDPALTEPIIRTEED
IHGTELTHNSRVYDSPGPAVVPAGLAAPPAEVKPAFVQTPSIREASSPCEPNPCGNASCT
AEEGVAFCFEAEVCHPNPCTNGATCVESADSFKCLCLPSYGGERCEIEEQRCEDGWTKFQ
GNCYLHVSDRAEWLEAEQRCRHLNAHLVSIITPEEQQFVSADAQDYQWIGLNDKTVAGDF
QWTDGSPLQYENWKLNQPDNFLNSSENCVVLSWHESGKWNDVPCNYHLPFTCKKGPVFCG
APPVVKNTRMFGNRRSEFPVNSIIRYQCNPGFRQRHLPVVRCQADGTWQKPKVECTDVKA
RNRIKRRSSRKSAVSGKNK
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtggaccgtgatcctgtctttatgtttgaatgtctcctctgcaacatttgac
tatctatacgagcagagatccttcatggatccggaggatattctgactgtgagcattcct
ctggagggcttgcagcgtcctctgctgggagaaactctgctgctgccctgctactttcag
gaccactctgctgaagattctgcttccttttcccaccgtatcaaatggagctatgtcaca
aaggaaaaggcgactaccattcttgtggctttggagagacaggtccgcatcagcgaaagt
tatctggacagagttcagctgaggagctacccccagactccaacagacgccagcatcaca
atatcagcgctacgttccagtgacacgggagtgtatcgctgtgaagttcagactggcatt
gaggatgcctatgacattgtgcatgtccttgttcaaggcatcgtgttccactatcggccc
tttatgggtcgctacactttgagttttgagaaagcgaaggcagcatgtgcccagaacagt
gcagtcattgcttctccagagcagcttcaagccgcattcgaagacggtttccaccagtgc
gacgctggctggttgtctgatcaaacagtgcggtacccaatccatgagtctcgcataaac
tgctacggcgacaaagaggaactcccaggggtcaggacgtatggcatgagagacctcaat
gagacatatgatgtttactgctttgcagataggatgccaggcagagtttttcacagcacc
tttgcagggaagttcaccttctctgaggctgcgctggcgtgctcctaccaaggagctcgg
ctggccaccacaggtcagctgtaccttgcatggcagggcgggatggacgtctgcaatgcc
ggctggctgagagatgggagtgtccgctaccccatcaatattcgacggccacagtgcgga
gggggtctgctgggggtgcgaacagtttatctccacacaaaccaaacaggatacccactt
cctggttctcgctatgatgccttctgttacacagattcccctgatgatgagggttcaggc
gcagacgaggggagtggtgttgtgattattaccacagtgacgaagaggccagagatgttc
ttcagcaagacgaccacagagagcgaagcagttggagaggtggagacccagcagccattc
gatctgagcttcaccaacagccagaagcccaacaagctgccacttcctcagccaacaaac
ttcacagacttcacctttgaccttattgaggccgtcaccaaccagccagctctacaaaag
gagcccaacaaaacctctgtcatctctccagcaggcgtggtcttccattaccgctcaccc
gctggccgttatgctctcacattcgttgaggctcagttggcctgccagggtgtcagaggc
tccatggccacaccacagcagctgcagcaagcatacgaggatggataccatcagtgtgat
gcaggttggcttctggaccagactgtgaggtatcctatcgtatttcctcgagaaaaatgt
gctggagatcttggagatcagcctggagttcggacgtatggcctaagaccagcagaggag
agatacgatgtttactgctacaccgaggaggtcaaaggagaggtttttcatgtgggatct
gctgagggtttcacctacgatgaggctgcttctgcctgtgaaaaccacagtgcggttctg
gcctccactggagagctctacgcagcctggaaacgaggcttggacaagtgccgagcaggt
tggctactggaccgcagcgttcgctaccccgtcaacagcccccggcctgggtgcggagga
gagacatcaggggtgcacactttgtactctcctccaaaccaaacacactaccctgaacct
gatgccagatttgatgcatactgtataagagttggctttctgtcaaatgaaactgaactg
aacatcacagatatccagaaggctccacctaaccagacattggatactgaaatattaagg
ccttatggtttcttcatcgttcctcccattcccgtggagatttcaggttctggctctggt
tcagcagactttgattcaggctctgcagtagataattctggagtacaatttaactcagga
gaccgggttacctctggagatcagtcaggatctggagatcagcctggatctggagatcga
gttaactctggagatcagtcaggatttggagaccaggttaactctggagatcagtctagt
tctggagatcagcctagttctggagatcagtctggttctggagatcagtctggttctgga
gatcagtctggatctggagaccaggttacctttggagacatatctggttctggaggcaaa
atccccattggagaccaagatgggtatacagacactgtggtgagcagcggaggatccggt
ttggccagtgcatctggttcaggatcaggactcagagttgttttctctggacccgacatt
gaagcagtagagggatcaacatcaggagaacctcaagaggctggagaaggaaacacagat
gttcttatatttcctttgtctgcagctgattctggggaactcagtggaagtggagataag
tccgagtctggatctggatctgacttcattgaaaaagatgctggacatctcagtggcatg
ggtcacatcttggatcaggagttgtcaggtttcattggatctttgtctggaagtggacga
tctggagacatttctggaagtggagatgctccgatcctaagaatagatgacaaactaatt
gatgcaaagaaggagtacaaccttgatggaggtccgttagatttcagtggttctgggatt
ctcagtgggtcaacctctgaaagtgactccgagtctcttactggtgtaacttttatgggt
tcaggcttcactaaacttattgggtcacattctggagaacaggaggaggcgactggggat
ttattctacagctctggaccagaaagtgggggacagatgtctggatttagaatctcaagt
tgcagttttgagtctagagctggagtttctggatctggtttctctacatctgaaacatca
acaaccaaaggtgaggaagagggcagtgctgcatttttcactcagggtctaatgatagaa
atacctggaaatgataaggtgcctctggagctgggagaaaactcagtggagtacagtgga
gaagcaagtggcaacaatggtttctactccggggatggaaacaaggacttagctgacgat
aacaccttcatgtcaggggtttcttcttctggagattcttctgatccactggtggtggtc
ccacccgctccatcagttgacccggcactaacagaacccatcataagaacagaggaagat
attcatgggactgaactgacgcacaactccagagtttatgattctccaggtccagcagtt
gtccctgcaggattagcagctcctcctgcagaagtcaaaccagcttttgtacaaacacca
tctatccgagaagcttccagcccatgtgaaccaaatccttgtggcaatgcttcctgcaca
gcagaggaaggggttgctttctgctttgaggcagaagtgtgccatcccaacccttgtacc
aacggagccacctgtgtggagagcgcagactctttcaaatgcttatgcctgcccagctac
ggaggggaacgctgtgagatcgaggagcagcgatgtgaagacggctggacgaagttccag
ggaaactgctacctgcacgtctctgacagggcagagtggctggaggcggagcaacgctgt
cggcacctgaacgctcacctggtcagcatcatcacaccagaggagcagcagtttgtcagc
gcggatgcgcaggactaccagtggatcggcctgaacgacaaaacggtggcgggcgatttc
cagtggacggatggctctccactgcaatatgaaaactggaagctgaaccagccagacaat
ttcctcaactcatcagagaactgcgtggttttgagctggcatgagagcggaaagtggaac
gacgttccctgcaactatcacctgcccttcacctgcaagaaggggccagtgttttgcggc
gctccgcctgtggtgaaaaacacgcgcatgtttggaaaccggaggtcggagtttcccgtc
aactccatcatccgttatcagtgcaacccgggattcagacagcgccatctacctgtggtc
cgctgccaagctgacgggacctggcagaaacccaaagtggagtgcacagatgtaaaagcc
aggaacagaataaaacgcaggagcagcaggaaatcagcagtgagcggaaaaaacaaatga
DBGET
integrated database retrieval system
