Poeciliopsis prolifica (blackstripe livebearer): 129354129
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Entry
129354129 CDS
T09758
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129354129
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Protocadherins
129354129
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
129354129
NCBI-ProteinID:
XP_054879594
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MYLSYFYPSALVFPVMIVVLIALCFTDGALSQIRYSVPEEAEHGTLVGNIAEDLGLDLTK
LASRRFQVVPSSRTPYLEVNLENGVLFVNEKIDREQICKQSASCQLNMEVFLENPLELFR
VEIEVVDINDNPPSFPETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYF
YLDVQTQTDGNKFAELVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDN
VPVFEQPVYTVSLSENVPVGTLVIQLNATDLDEGLNGEIVYSFSNHISSRVKELFGIDPR
TGRIEVRGEVDFEESSLYQIFVQAKDLGPNAVPAHCKVLVKVADLNDNAPEITFSTVTES
VSEKAAPGTVIALLSVTDRDAEENGQIHVEILGDVPFKLKSSFRNYFTIVTDGLLNREQA
DSYSVTVVARDKGTPSLASSKSIRVHVSDENDNAPTFTQPVYDVYVTENNVPGAYIHAVT
ALDPDIGQNALITYSILECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFSFMVRAK
DSGAPELSSNATVKVIIVDQNDNAPLVLAPLGKNGTAQEPLPRSAEPGYLVTRVVAMDAD
DGENARLSYSIQRGNDNGMFRMDWRTGELRTARRVSSKRDPHQQYDLVIEVRDHGQPPLS
SSASILVMLVDSMAEGRGVGDKVGTSKAKDGALDLTLILIIALGSVSFIFLLVMIVLAVR
CQKDKKLNIYTCLTSDCCLACSSCCSRQGRSRKKKLSKADIMLVQSTVNVSGPGTAQVPV
EESGSFGSHHQNQNYCYQVCLTPESAKTDLMFLKPCSPSRSTDTDHNPCGAIGSGYTDQQ
PDIISNGSILSNETKHQRTELSYLVERPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHD
ATNRGHSSGADLFSNCTEECKALGHSDRCWMPSFVPSDGRQGLDYRSNLHVPGMDSVPDT
ERGRGFASSFRVDIPETA
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtatttatcttatttttacccaagtgcacttgtttttccggtcatgattgtggttttg
atagctctgtgttttacggatggagcgctctctcagatccgctactctgtcccggaggag
gcagagcatggcacgctggtggggaacatcgctgaagacctggggctggaccttaccaaa
ctggcctcccggagattccaggtagtgcctagttccagaacaccgtatctggaggtaaac
cttgagaacggcgtcctgttcgttaacgagaaaatcgatagggagcaaatctgcaagcag
agtgccagctgccagctcaacatggaggtgttcttggagaaccctctggagctattcagg
gtcgaaatcgaagtggtggacattaacgacaacccaccaagcttcccggagacagacatc
acggtggaaatctcagagagcgcaacccctggcacccggttccctttggagagtgcgttc
gacccggacgtgggctccaacgcgttgcgcacatatgatatcacaaccaacaattacttt
tacctggacgtgcagacccaaaccgacggaaataaatttgcagaacttgtcctggagaag
cctctggacagggagcagcaggcagcgcacaggtacgtgctcactgcggtggacggcgga
cagcctcctcggactggcaccgcgctgctggtagtcaaagtgttggactctaacgataat
gtgcccgtgtttgagcagcccgtctacacagtgagtctgtcggagaacgtaccggtgggc
acgctggttatccagctgaacgccaccgacctagatgagggactgaacggggaaatagtt
tactccttcagcaaccacatctccagtcgcgtaaaggagctgttcggcatagacccgcgg
accgggcgcatcgaagtccgtggggaggtggatttcgaagagagcagcctctatcagatc
tttgtccaggctaaggacctcgggccaaacgccgtgcccgcgcactgtaaagtgttggtc
aaagtggcagacttgaacgacaacgcaccggaaatcaccttcagcactgtcacggagtcg
gtgagtgaaaaagctgctcccggtactgtcatcgccctgttaagtgtgacggaccgagac
gcagaggagaacggacagatccacgtggaaatcctgggtgatgtcccgtttaaattaaag
tcgtctttcaggaattacttcaccatagtgactgatgggctcctgaaccgggagcaggca
gactcctactccgtgaccgtggtggcgcgggataaaggaactccttcgctcgcctccagt
aagtccatccgcgtccatgtgtcagatgaaaacgacaatgcacccactttcactcaaccc
gtttatgatgtgtatgtgacagagaacaatgtaccaggagcgtacatccacgctgtgacg
gccctggatcctgatataggacagaacgctctcattacttactccatcttagagtgtgac
attcagggcatgtcagtgaaaacctatgtgtctatcaacgaggagacaggatacctttat
gcactcaggtcttttgattatgagcagctaaaagatttcagctttatggtcagggccaag
gactccggtgcccctgagctttcctctaatgcaactgtcaaagtcataattgttgatcaa
aacgataatgctcccctggttcttgctcccctggggaaaaatggaactgcgcaggagccc
cttccccgctcagctgagccaggctacctggtgacccgggttgtggccatggatgcagat
gatggtgagaatgcccgcctgtcctacagcattcagagaggtaacgacaacgggatgttt
aggatggactggaggactggtgaactcaggacagcaaggcgggtgtcatctaagcgagat
ccccaccagcagtatgacctggtgattgaggttagagaccatgggcagcctccattgtcc
tccagtgccagcatactggtgatgctggtagacagcatggctgaaggccggggcgtgggg
gacaaagtgggcaccagcaaggccaaagatggtgctttggacctcaccctcatcctaatc
attgcactcggttctgtctccttcattttcctccttgtgatgattgtgttggccgtgcgc
tgccagaaggacaaaaagctcaacatttatacctgcctaacgagtgactgctgtcttgca
tgcagctcctgctgctcacggcagggtagatcccgcaagaaaaagctcagcaaggcggac
atcatgcttgtgcaaagcactgtcaatgtcagcgggcctggaacggctcaagtccctgtg
gaggagtctgggagctttggctcccaccatcaaaaccagaactattgctatcaggtatgt
ctgactccagagtctgccaaaactgacctcatgttcctaaagccgtgtagtccatctagg
agcacagacaccgatcacaacccgtgtggtgccatagggtcagggtacacagaccagcag
cctgacatcatatcaaacggcagcattttatcaaacgagaccaaacaccagcgaaccgaa
ctcagctacctggtggagaggccgaggcgtgtcaacagctcagcttttcaggaggcagat
ctggtcagctctaaagacagtggccacggagatagcgagcaaggagacagtgaccacgac
gccacaaatcgaggacattcctctggtgctgatctgttttctaactgcacagaagagtgt
aaggccctggggcactctgatcgctgctggatgcccagctttgtgccctctgatgggcgc
cagggtctagactaccgcagcaacctccatgtgcccggcatggactcagtcccagataca
gagcgaggaagagggtttgctagctccttccgtgtggacataccagagactgcatga
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