Poeciliopsis prolifica (blackstripe livebearer): 129354223
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Entry
129354223 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04517
IgSF CAM signaling
pprl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129354223
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129354223
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprl04812
]
129354223
Cytoskeleton proteins [BR:
pprl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129354223
Intermediate filaments
Intermediate filament-binding proteins
129354223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
129354223
NCBI-ProteinID:
XP_054879717
LinkDB
All DBs
Position
Unknown
AA seq
2416 aa
AA seq
DB search
MSGHSGWREVLACYGEKVDHGGSGGRAETEFSILTKQRIFQMAGFLQSSRPANRSRFQRV
PLIPTAGNRWAEQRAGRGRSHGEVIMTSVAAELDHMEIQQQYSDGVNNRWDADDWDNENS
SARLFERSRIKALADEREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVL
SGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIIL
RFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKH
RPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVEHPDEKSIITYVVTYYH
YFSKMKALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLV
GVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVFTPREGKLISDINKA
WERLEKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQ
AVEAATKKHEAIETDIAAYEERVQAVVAVAKELEAESYHDIKRITARKDNVIRLWEYLLE
LLKARRHRLELNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEA
DISIQADRVRNVNSNAQKFASDTDGTLQPCDPQVIRDRVAHMEFCYQELNQLAAERARLE
ESRRLWKFFWEMAEEEGWIREKEQILSLEDHGKDLTGTVRLLSQHKAFEDEMSGRAAHLQ
QTIRQGQQLVDENHFGAEKIKERIQDIQDQWAALERLSAVRKTRLQEACNLHQFQADADD
IDTWMLDVLRIVSSVDVGHDEFSAQALVKKHKDVAEEIGSYRPVIEALHEQAQTLPPQEA
GSQEVRARLAGIEERYQEVAELTRHRKQALQDALALYKMLSEASACELWVDEKEQWLNGM
DIPDKLEDLEVVQHRFESLEPEMNSQASRVAVVNQVARQLVHSGHPGETEIRAQQDQLNT
RWSQFRDLVDQKKENLNSALGVQNYHLECNETKSWIKEKTKVIESTQELGNDLAGVMALQ
RKLTGMERDLAAIEDKLTDLDKEAERLASEHPEQAGAIRGRLAEITAVWDDMKGTLKNRE
ESLGEASKLQQFLRELDDFQSWLSRTQTAIASEDMPNALAEAEKLLAQHENIKNEIRNYE
EDYQKMRDMGDMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQSLLSQSHAYQLFL
RDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEKISGVVDTGRRL
VADGNINAERIQEKVDSIDQRHKKNRQAAKDLLSRLKDNRDLQKFLQDCQELSLWINEKM
LTAQDMTYDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGKALMAEKPETEAMVKEKL
ASLKVMWNDLESTTQTKAKCLFDANKAELFTQSCADLDKWLTGLDGQLQSDDFGKDLTSV
NIMLKKQQMLESQVEVRQKEVEELQKQSQALSQEGKGSDEADGKRISVENKFQALLAPLK
MRRDNLMASREIHQFNRDVEDEILWVEERLPLATSTDHGHNLQTVQLLIKKNQTLQKEIQ
GHQPRYDDIFERSQQVLRAGSPTAEPIRQRLSELQALWERIRKETENRHSRLSEAHEAQQ
YYFDAAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYADAVHQLSSTSR
GLVAAGHPDSERIGMRQSQVDKLYAGLKDLAEERRGKLDERFRLFQLNREVDDLEQWIAE
REVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDGVNKLADELINAGHGDAATI
AEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEILHRILDKHKKLPEELGRDQ
NTVETLQRMHTTFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREGEVLEAWKNL
LEAAEARRSKLLDTADKFRFFSMVRDLMLWMDDVIRLIEAQEKPRDVSSVELLMNNHQGI
KAEIDARNDSFTACIELGKALLARKHYAAEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLV
LEVHQFSRDAGVAEAWLLGQEPYLSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFAAL
ERLTTMELLEVRRRQEEEERKRQPAEAAEAAAQSREGDPVSQNGLPSDQESPRENVDEAV
NGEPSPAGSPGAGRKAKASQAATLPAKSQQDGATCLLEAFLHRKHEWEGHNKKASNRSWH
NVFCVINQQEMGFYKDQKSAAQGVPYHSEIPVSLKEALCEVALDYKKKKHVFKLKLTDGN
EYLFQAKDDEEMTAWISAIAAAGSRPEVTPSSHSTPAPAARAQTLPATVAASTAESSPGK
REKDKEKRFSLFSKKK
NT seq
7251 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccacagtggatggcgggaagttttggcttgctatggtgagaaagttgatcat
ggcggcagtggagggagagctgagactgaattctccattttgaccaagcagaggattttc
cagatggccggtttcctccagtcgtcccggccggccaatcggagccgctttcagagggtc
ccgctgatccccacagcaggtaacaggtgggcggagcagcgagcggggcgggggcggagt
cacggcgaggtcatcatgacgtcggtggcggcggagttggaccacatggagatccagcag
cagtacagcgacggcgtcaataaccgctgggacgccgacgactgggacaacgagaacagc
tcggcccgcctctttgagcgctcacgcatcaaggcgctggcagatgagcgtgaagcggtg
cagaagaagaccttcactaagtgggtgaactcccacctgtccagggtgtcgtgtcggatc
acggacctgtacatggacctgagggacggccggatgctcatcaagctgctggaggttctg
tctggagagaggctgcccaaacccaccaagggccgcatgcggatccactgcctggagaac
gtggacaaggccctgcagttcctgaaggagcagcgggtccacctggagaacatgggctcc
cacgacatcgtggacggaaaccaccgcctcacgctgggcctcatctggaccatcatcctc
cgcttccagatccaggacatcagtgtggagacggaggacaacaaggagaagaagtcggct
aaagacgccctgctgctctggtgccagatgaagactgcagggtatccaaacgtcaacatc
cacaacttcaccaccagctggagagacgggatggccttcaacgccctcatccacaaacac
agacctgatctgatcgactttgataaactgaagaagtcaaacgctcactacaacctgcag
aacgccttcaacctggcagagcaacacctggggctcaccaagctgctggacccggaagac
atcagcgttgaacatcctgatgagaaatccatcatcacctacgtcgtcacctattaccac
tacttctccaagatgaaggcgctgaaggtggagggcaagaggatcggcaaggttctggac
aacgccatcgagacggagaagatgattgagaagtacgagtctctggcgtcggacctgctg
gagtggatcgagcagaccatcatcatcctcaacaacaggaagttcgccaactcgctggtg
ggcgtccagcagcagctgcaggccttcaacacgtaccgcaccgtggagaaaccacccaag
ttcacagagaaggggaacctggaggttctgctcttcaccatccagagtaagatgagagcc
aacaaccagaaagtttttacgccgcgcgaaggaaagctcatctctgacatcaacaaggcc
tgggagcgtctggagaaggcggagcatgagcgggagctggccctgaggacggagctgatc
cgccaggagaagctggagcagctggcccgccgcttcgaccgcaaggccgccatgagggag
acgtggctgagcgagaaccagaggctggtctcacaggataactttggattcgacctgcag
gccgtggaggcggccactaagaagcatgaggccatagagacggacatcgcggcgtacgag
gagcgcgttcaggcggtggttgccgtggcgaaggagctggaggcggagagttaccatgac
atcaagcgcatcacggccaggaaggacaacgtgatccggctgtgggaatacctgctggag
ctgctgaaggcccggcgccacaggttggagctcaacctgggcctgcagagggttttccag
gaaatgctctacatcatggactggatggacgagatgaagatgctgctgctgtcccaggac
tacgggaagcacctgttgggtgtggaggatctgctgcagaaacacgctctggtggaggcc
gacatctccatccaggccgaccgcgtccgcaacgtcaacagcaacgcccagaagttcgcc
agcgacaccgacggtacgctacaaccctgcgacccgcaggtcatccgggaccgcgtggct
cacatggagttctgctaccaggagctgaaccagctggcggcggagcgcgcccgtctggag
gaatcccgccgcctctggaagttcttctgggagatggccgaggaggagggctggatccgg
gagaaggagcagatcctgtccttggaggatcacgggaaggatctgacgggaacggtgcgg
ctgctgagtcagcacaaagccttcgaggacgagatgagcggccgcgccgcccacctgcag
cagaccatcaggcagggccagcagctggtggacgaaaaccacttcggagccgagaagatc
aaggagcgcatccaggacatccaggatcagtgggcggctctggagcgtctgtctgccgta
cggaaaacccgcctgcaggaggcctgcaacctgcaccagttccaggctgacgccgacgac
atcgacacctggatgctggacgtcctgcgcatcgtctccagcgtggacgtcggccacgat
gagttctcggcccaggctctggtgaagaagcacaaagacgtggcggaggagatcggcagc
taccggcccgtcatcgaggcgctgcacgagcaggcgcagacgctgccgccgcaggaggcc
ggctcccaggaggtccgagcccggctggccggcatcgaggagcggtaccaggaagtggcg
gagctgacccggcacaggaagcaggcgctgcaggacgcgctggcgctctacaagatgctg
agcgaggccagcgcctgcgagctgtgggtcgacgagaaggagcagtggctcaacggcatg
gacatccccgacaagctggaggacctggaggtggttcagcaccggttcgagagtctggag
ccggagatgaacagccaggcgtcccgagtcgccgtggtgaaccaggtggcccggcagctg
gtccacagcgggcaccccggggagaccgagatccgggcccagcaggaccagctcaacacc
aggtggagccagttcagagacctggtggaccagaagaaggagaacctgaactcggcgctg
ggcgtccagaactaccacctggagtgcaacgagaccaagtcctggatcaaggagaagacc
aaggtgatcgagtcgacccaggagctgggcaacgacctggccggggtcatggcgctgcag
aggaagctgaccggcatggagcgcgacctggccgccatcgaggacaagctgacggacctg
gacaaggaggcggagcggctggcgagcgaacacccggagcaggccggcgccatcaggggc
cggctggccgagatcaccgccgtctgggacgacatgaaggggacgctgaagaaccgcgag
gagtctctgggcgaggccagcaagctgcagcagttcctgcgggagctggacgacttccag
tcgtggctgtcccgcacgcagacggccatcgcctcggaggacatgcccaacgcgctggcc
gaggccgagaagctgctggcccagcacgagaacatcaagaacgagatccgcaactacgag
gaggactaccagaagatgagggacatgggggacatggtgacgcagggccagacggacgcc
cagtacatgttcctgcggcagcggctgcaggcgctcgacaccggctggaacgagctgcac
aagatgtgggagaaccggcagagcctgctgtcccagtcccacgcataccagctgttcctg
agggacaccaagcaggccgaggccttcctcaacaaccaggaatacgtcctggcccacacc
gagatgccgaccaccctggagggcgccgaggccgccatcaagaagcaggaggacttcatg
accaccatggacgccaacgaggaaaagatcagcggcgtggtcgacaccgggcgccgcctg
gtcgctgatggcaacatcaacgccgagcgcatccaggagaaggtggactccatcgaccag
agacacaagaagaaccggcaggcggctaaggacctgctcagcaggctgaaggacaacagg
gacctgcagaagttcctgcaggactgccaagagctgtccctgtggatcaacgagaagatg
ctgacggctcaggacatgacgtacgacgaggccaggaacctgcacagcaagtggctgaag
caccaggccttcatggccgagctgcagtccaacaaggagtggctggacaagatcgaaaag
gacggcaaggcgctgatggcagagaagccagagacggaggccatggtgaaggagaagctg
gcgtccctgaaggtcatgtggaacgaccttgagtcgaccacccagaccaaggccaagtgt
ctgtttgacgccaacaaggccgagcttttcacccagagctgcgccgacctggacaagtgg
ctgaccggcctggacggccagctgcagtccgacgacttcggcaaagacctgacgtccgtc
aacatcatgctgaagaagcagcagatgctggagagccaggtggaggtgcgccagaaggag
gtggaggagctgcagaagcagtcgcaggcgctgagccaggagggcaaaggttctgacgag
gcggacgggaagcggatcagcgtggagaacaagttccaggcgctgctggcgccgctcaag
atgaggcgcgacaacctgatggcgtcgcgcgagatccaccagttcaacagagacgtggag
gacgagatactgtgggtggaggagcggctgcctctggccacgtccaccgaccacggacac
aacctgcagacggtgcagctgctcatcaagaagaaccagacgctgcagaaggagatccag
ggccaccagcctcgttatgacgacatctttgagcgcagccagcaggtcctgcgggccggc
agccccacggccgagccgatccgccagaggctcagcgagctgcaggcgctgtgggagcgg
atccggaaggagacggagaaccggcattcccgcctcagcgaggcccacgaggcccagcag
tactactttgacgctgcggaggccgaggcctggatgagcgagcaggagctgtacatgatg
tctgaggagaaggccaaggatgagcagagctcggtggccatgctgaagaagcatcagatc
ctggagcaggcggtggaggattacgccgacgccgtccatcagctgtccagcaccagccgg
ggcctggtggccgcaggtcaccccgacagcgagcgcatcggcatgcggcagtcgcaggtg
gacaagctgtacgcggggctgaaggacctggcggaggagcggcgcgggaagctggacgag
cgtttccgtctgttccagctgaaccgggaggtggacgacctggagcagtggatcgccgag
cgggaggtggtggccgggtcgcacgagctgggccaggactacgagcacgtcacgatgctg
caggagcgtttccgagagttcgcccgggacacggggaacatcggtcaggagcgcgtcgac
ggcgtcaacaagctggcggacgagctgatcaacgcgggccacggcgacgcggccaccatc
gccgagtggaaggacgggctgaacgaggcgtgggccgacctgctggagctcatcgacacg
cgcacgcagatcctggccgcctcctacgagctgcacaagttctaccacgacgccaaggag
atcctgcaccgcatcctggacaaacacaagaagctgccggaggagctgggccgcgaccag
aacaccgtggagacgctgcagaggatgcacaccaccttcgagcacgacatccaggcgctg
ggaacacaggtccggcagctgcaggaagacgccgtccgtctgcagtcggcgtacgccgga
gacaaagccgacgacatccagaagagagaaggagaggtgctggaggcctggaagaacctc
ctggaggcggcggaggcccggcgctccaagctgctggacacggccgataagttccggttc
ttcagcatggtgcgggacctgatgctgtggatggacgacgtcatccggctcatcgaggcc
caggagaaacccagggacgtgtcatcggtggagctgctgatgaacaaccaccagggcatc
aaggcggagatcgacgcccgaaacgacagcttcacggcctgcatcgagctgggcaaggcg
ctgctggcccggaagcactacgctgcagaggagattaaggagaagttgctccagctgacg
gataagaggaaagagatgatcgataagtgggaggatcgctgggagtggctgaggctggtg
ctggaggtgcaccagttctcgcgggacgcgggcgtggcggaggcgtggctcctgggccag
gagccgtacctgtccagcagggagatgggccagagcgtggacgaggtggagaagctcatc
aaacgccacgaggccttcgagaagtccgccgccacctgggaggaacgcttcgccgcgctg
gagaggctgaccacgatggagttactggaagtgagaagaaggcaagaggaagaggagagg
aagaggcagccggcagaggctgctgaggctgcagcccagagcagggagggcgacccggtg
tcccagaacgggctgccgtccgaccaggagtcgccccgggagaacgtggacgaggcggtg
aacggggagcccagccccgcggggtcaccgggcgccggtcgtaaggccaaggccagccag
gcggcgacgctgccggcgaagagccagcaggacggcgccacctgcctgctggaggccttc
ctgcaccgcaaacacgagtgggagggccacaacaagaaggcctccaacaggtcctggcac
aacgtgttctgtgtgatcaaccagcaggagatgggtttctataaggaccagaagagcgcg
gcgcagggcgtcccctaccacagcgagatccccgtcagcctgaaggaggcgctgtgcgag
gtggcgctcgactacaagaagaagaaacacgtcttcaaactcaagctcaccgacgggaac
gagtatctcttccaagccaaagacgacgaggagatgaccgcctggatctcggccatcgcg
gcggcgggctccaggccggaggtgacgcccagcagccacagcacgccggcccccgccgcc
cgcgcccagacgctgccggccaccgtggcggcctccaccgccgagtccagcccgggcaaa
cgggagaaagacaaggagaaacgcttcagtctgttcagcaagaagaagtag
DBGET
integrated database retrieval system
