Poeciliopsis prolifica (blackstripe livebearer): 129354223
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Entry
129354223 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129354223
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprl04812
]
129354223
Cytoskeleton proteins [BR:
pprl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129354223
Intermediate filaments
Intermediate filament-binding proteins
129354223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
129354223
NCBI-ProteinID:
XP_054879717
LinkDB
All DBs
Position
Unknown
AA seq
2416 aa
AA seq
DB search
MSGHSGWREVLACYGEKVDHGGSGGRAETEFSILTKQRIFQMAGFLQSSRPANRSRFQRV
PLIPTAGNRWAEQRAGRGRSHGEVIMTSVAAELDHMEIQQQYSDGVNNRWDADDWDNENS
SARLFERSRIKALADEREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVL
SGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIIL
RFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKH
RPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVEHPDEKSIITYVVTYYH
YFSKMKALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLV
GVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVFTPREGKLISDINKA
WERLEKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQ
AVEAATKKHEAIETDIAAYEERVQAVVAVAKELEAESYHDIKRITARKDNVIRLWEYLLE
LLKARRHRLELNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEA
DISIQADRVRNVNSNAQKFASDTDGTLQPCDPQVIRDRVAHMEFCYQELNQLAAERARLE
ESRRLWKFFWEMAEEEGWIREKEQILSLEDHGKDLTGTVRLLSQHKAFEDEMSGRAAHLQ
QTIRQGQQLVDENHFGAEKIKERIQDIQDQWAALERLSAVRKTRLQEACNLHQFQADADD
IDTWMLDVLRIVSSVDVGHDEFSAQALVKKHKDVAEEIGSYRPVIEALHEQAQTLPPQEA
GSQEVRARLAGIEERYQEVAELTRHRKQALQDALALYKMLSEASACELWVDEKEQWLNGM
DIPDKLEDLEVVQHRFESLEPEMNSQASRVAVVNQVARQLVHSGHPGETEIRAQQDQLNT
RWSQFRDLVDQKKENLNSALGVQNYHLECNETKSWIKEKTKVIESTQELGNDLAGVMALQ
RKLTGMERDLAAIEDKLTDLDKEAERLASEHPEQAGAIRGRLAEITAVWDDMKGTLKNRE
ESLGEASKLQQFLRELDDFQSWLSRTQTAIASEDMPNALAEAEKLLAQHENIKNEIRNYE
EDYQKMRDMGDMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQSLLSQSHAYQLFL
RDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEKISGVVDTGRRL
VADGNINAERIQEKVDSIDQRHKKNRQAAKDLLSRLKDNRDLQKFLQDCQELSLWINEKM
LTAQDMTYDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGKALMAEKPETEAMVKEKL
ASLKVMWNDLESTTQTKAKCLFDANKAELFTQSCADLDKWLTGLDGQLQSDDFGKDLTSV
NIMLKKQQMLESQVEVRQKEVEELQKQSQALSQEGKGSDEADGKRISVENKFQALLAPLK
MRRDNLMASREIHQFNRDVEDEILWVEERLPLATSTDHGHNLQTVQLLIKKNQTLQKEIQ
GHQPRYDDIFERSQQVLRAGSPTAEPIRQRLSELQALWERIRKETENRHSRLSEAHEAQQ
YYFDAAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYADAVHQLSSTSR
GLVAAGHPDSERIGMRQSQVDKLYAGLKDLAEERRGKLDERFRLFQLNREVDDLEQWIAE
REVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDGVNKLADELINAGHGDAATI
AEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEILHRILDKHKKLPEELGRDQ
NTVETLQRMHTTFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREGEVLEAWKNL
LEAAEARRSKLLDTADKFRFFSMVRDLMLWMDDVIRLIEAQEKPRDVSSVELLMNNHQGI
KAEIDARNDSFTACIELGKALLARKHYAAEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLV
LEVHQFSRDAGVAEAWLLGQEPYLSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFAAL
ERLTTMELLEVRRRQEEEERKRQPAEAAEAAAQSREGDPVSQNGLPSDQESPRENVDEAV
NGEPSPAGSPGAGRKAKASQAATLPAKSQQDGATCLLEAFLHRKHEWEGHNKKASNRSWH
NVFCVINQQEMGFYKDQKSAAQGVPYHSEIPVSLKEALCEVALDYKKKKHVFKLKLTDGN
EYLFQAKDDEEMTAWISAIAAAGSRPEVTPSSHSTPAPAARAQTLPATVAASTAESSPGK
REKDKEKRFSLFSKKK
NT seq
7251 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccacagtggatggcgggaagttttggcttgctatggtgagaaagttgatcat
ggcggcagtggagggagagctgagactgaattctccattttgaccaagcagaggattttc
cagatggccggtttcctccagtcgtcccggccggccaatcggagccgctttcagagggtc
ccgctgatccccacagcaggtaacaggtgggcggagcagcgagcggggcgggggcggagt
cacggcgaggtcatcatgacgtcggtggcggcggagttggaccacatggagatccagcag
cagtacagcgacggcgtcaataaccgctgggacgccgacgactgggacaacgagaacagc
tcggcccgcctctttgagcgctcacgcatcaaggcgctggcagatgagcgtgaagcggtg
cagaagaagaccttcactaagtgggtgaactcccacctgtccagggtgtcgtgtcggatc
acggacctgtacatggacctgagggacggccggatgctcatcaagctgctggaggttctg
tctggagagaggctgcccaaacccaccaagggccgcatgcggatccactgcctggagaac
gtggacaaggccctgcagttcctgaaggagcagcgggtccacctggagaacatgggctcc
cacgacatcgtggacggaaaccaccgcctcacgctgggcctcatctggaccatcatcctc
cgcttccagatccaggacatcagtgtggagacggaggacaacaaggagaagaagtcggct
aaagacgccctgctgctctggtgccagatgaagactgcagggtatccaaacgtcaacatc
cacaacttcaccaccagctggagagacgggatggccttcaacgccctcatccacaaacac
agacctgatctgatcgactttgataaactgaagaagtcaaacgctcactacaacctgcag
aacgccttcaacctggcagagcaacacctggggctcaccaagctgctggacccggaagac
atcagcgttgaacatcctgatgagaaatccatcatcacctacgtcgtcacctattaccac
tacttctccaagatgaaggcgctgaaggtggagggcaagaggatcggcaaggttctggac
aacgccatcgagacggagaagatgattgagaagtacgagtctctggcgtcggacctgctg
gagtggatcgagcagaccatcatcatcctcaacaacaggaagttcgccaactcgctggtg
ggcgtccagcagcagctgcaggccttcaacacgtaccgcaccgtggagaaaccacccaag
ttcacagagaaggggaacctggaggttctgctcttcaccatccagagtaagatgagagcc
aacaaccagaaagtttttacgccgcgcgaaggaaagctcatctctgacatcaacaaggcc
tgggagcgtctggagaaggcggagcatgagcgggagctggccctgaggacggagctgatc
cgccaggagaagctggagcagctggcccgccgcttcgaccgcaaggccgccatgagggag
acgtggctgagcgagaaccagaggctggtctcacaggataactttggattcgacctgcag
gccgtggaggcggccactaagaagcatgaggccatagagacggacatcgcggcgtacgag
gagcgcgttcaggcggtggttgccgtggcgaaggagctggaggcggagagttaccatgac
atcaagcgcatcacggccaggaaggacaacgtgatccggctgtgggaatacctgctggag
ctgctgaaggcccggcgccacaggttggagctcaacctgggcctgcagagggttttccag
gaaatgctctacatcatggactggatggacgagatgaagatgctgctgctgtcccaggac
tacgggaagcacctgttgggtgtggaggatctgctgcagaaacacgctctggtggaggcc
gacatctccatccaggccgaccgcgtccgcaacgtcaacagcaacgcccagaagttcgcc
agcgacaccgacggtacgctacaaccctgcgacccgcaggtcatccgggaccgcgtggct
cacatggagttctgctaccaggagctgaaccagctggcggcggagcgcgcccgtctggag
gaatcccgccgcctctggaagttcttctgggagatggccgaggaggagggctggatccgg
gagaaggagcagatcctgtccttggaggatcacgggaaggatctgacgggaacggtgcgg
ctgctgagtcagcacaaagccttcgaggacgagatgagcggccgcgccgcccacctgcag
cagaccatcaggcagggccagcagctggtggacgaaaaccacttcggagccgagaagatc
aaggagcgcatccaggacatccaggatcagtgggcggctctggagcgtctgtctgccgta
cggaaaacccgcctgcaggaggcctgcaacctgcaccagttccaggctgacgccgacgac
atcgacacctggatgctggacgtcctgcgcatcgtctccagcgtggacgtcggccacgat
gagttctcggcccaggctctggtgaagaagcacaaagacgtggcggaggagatcggcagc
taccggcccgtcatcgaggcgctgcacgagcaggcgcagacgctgccgccgcaggaggcc
ggctcccaggaggtccgagcccggctggccggcatcgaggagcggtaccaggaagtggcg
gagctgacccggcacaggaagcaggcgctgcaggacgcgctggcgctctacaagatgctg
agcgaggccagcgcctgcgagctgtgggtcgacgagaaggagcagtggctcaacggcatg
gacatccccgacaagctggaggacctggaggtggttcagcaccggttcgagagtctggag
ccggagatgaacagccaggcgtcccgagtcgccgtggtgaaccaggtggcccggcagctg
gtccacagcgggcaccccggggagaccgagatccgggcccagcaggaccagctcaacacc
aggtggagccagttcagagacctggtggaccagaagaaggagaacctgaactcggcgctg
ggcgtccagaactaccacctggagtgcaacgagaccaagtcctggatcaaggagaagacc
aaggtgatcgagtcgacccaggagctgggcaacgacctggccggggtcatggcgctgcag
aggaagctgaccggcatggagcgcgacctggccgccatcgaggacaagctgacggacctg
gacaaggaggcggagcggctggcgagcgaacacccggagcaggccggcgccatcaggggc
cggctggccgagatcaccgccgtctgggacgacatgaaggggacgctgaagaaccgcgag
gagtctctgggcgaggccagcaagctgcagcagttcctgcgggagctggacgacttccag
tcgtggctgtcccgcacgcagacggccatcgcctcggaggacatgcccaacgcgctggcc
gaggccgagaagctgctggcccagcacgagaacatcaagaacgagatccgcaactacgag
gaggactaccagaagatgagggacatgggggacatggtgacgcagggccagacggacgcc
cagtacatgttcctgcggcagcggctgcaggcgctcgacaccggctggaacgagctgcac
aagatgtgggagaaccggcagagcctgctgtcccagtcccacgcataccagctgttcctg
agggacaccaagcaggccgaggccttcctcaacaaccaggaatacgtcctggcccacacc
gagatgccgaccaccctggagggcgccgaggccgccatcaagaagcaggaggacttcatg
accaccatggacgccaacgaggaaaagatcagcggcgtggtcgacaccgggcgccgcctg
gtcgctgatggcaacatcaacgccgagcgcatccaggagaaggtggactccatcgaccag
agacacaagaagaaccggcaggcggctaaggacctgctcagcaggctgaaggacaacagg
gacctgcagaagttcctgcaggactgccaagagctgtccctgtggatcaacgagaagatg
ctgacggctcaggacatgacgtacgacgaggccaggaacctgcacagcaagtggctgaag
caccaggccttcatggccgagctgcagtccaacaaggagtggctggacaagatcgaaaag
gacggcaaggcgctgatggcagagaagccagagacggaggccatggtgaaggagaagctg
gcgtccctgaaggtcatgtggaacgaccttgagtcgaccacccagaccaaggccaagtgt
ctgtttgacgccaacaaggccgagcttttcacccagagctgcgccgacctggacaagtgg
ctgaccggcctggacggccagctgcagtccgacgacttcggcaaagacctgacgtccgtc
aacatcatgctgaagaagcagcagatgctggagagccaggtggaggtgcgccagaaggag
gtggaggagctgcagaagcagtcgcaggcgctgagccaggagggcaaaggttctgacgag
gcggacgggaagcggatcagcgtggagaacaagttccaggcgctgctggcgccgctcaag
atgaggcgcgacaacctgatggcgtcgcgcgagatccaccagttcaacagagacgtggag
gacgagatactgtgggtggaggagcggctgcctctggccacgtccaccgaccacggacac
aacctgcagacggtgcagctgctcatcaagaagaaccagacgctgcagaaggagatccag
ggccaccagcctcgttatgacgacatctttgagcgcagccagcaggtcctgcgggccggc
agccccacggccgagccgatccgccagaggctcagcgagctgcaggcgctgtgggagcgg
atccggaaggagacggagaaccggcattcccgcctcagcgaggcccacgaggcccagcag
tactactttgacgctgcggaggccgaggcctggatgagcgagcaggagctgtacatgatg
tctgaggagaaggccaaggatgagcagagctcggtggccatgctgaagaagcatcagatc
ctggagcaggcggtggaggattacgccgacgccgtccatcagctgtccagcaccagccgg
ggcctggtggccgcaggtcaccccgacagcgagcgcatcggcatgcggcagtcgcaggtg
gacaagctgtacgcggggctgaaggacctggcggaggagcggcgcgggaagctggacgag
cgtttccgtctgttccagctgaaccgggaggtggacgacctggagcagtggatcgccgag
cgggaggtggtggccgggtcgcacgagctgggccaggactacgagcacgtcacgatgctg
caggagcgtttccgagagttcgcccgggacacggggaacatcggtcaggagcgcgtcgac
ggcgtcaacaagctggcggacgagctgatcaacgcgggccacggcgacgcggccaccatc
gccgagtggaaggacgggctgaacgaggcgtgggccgacctgctggagctcatcgacacg
cgcacgcagatcctggccgcctcctacgagctgcacaagttctaccacgacgccaaggag
atcctgcaccgcatcctggacaaacacaagaagctgccggaggagctgggccgcgaccag
aacaccgtggagacgctgcagaggatgcacaccaccttcgagcacgacatccaggcgctg
ggaacacaggtccggcagctgcaggaagacgccgtccgtctgcagtcggcgtacgccgga
gacaaagccgacgacatccagaagagagaaggagaggtgctggaggcctggaagaacctc
ctggaggcggcggaggcccggcgctccaagctgctggacacggccgataagttccggttc
ttcagcatggtgcgggacctgatgctgtggatggacgacgtcatccggctcatcgaggcc
caggagaaacccagggacgtgtcatcggtggagctgctgatgaacaaccaccagggcatc
aaggcggagatcgacgcccgaaacgacagcttcacggcctgcatcgagctgggcaaggcg
ctgctggcccggaagcactacgctgcagaggagattaaggagaagttgctccagctgacg
gataagaggaaagagatgatcgataagtgggaggatcgctgggagtggctgaggctggtg
ctggaggtgcaccagttctcgcgggacgcgggcgtggcggaggcgtggctcctgggccag
gagccgtacctgtccagcagggagatgggccagagcgtggacgaggtggagaagctcatc
aaacgccacgaggccttcgagaagtccgccgccacctgggaggaacgcttcgccgcgctg
gagaggctgaccacgatggagttactggaagtgagaagaaggcaagaggaagaggagagg
aagaggcagccggcagaggctgctgaggctgcagcccagagcagggagggcgacccggtg
tcccagaacgggctgccgtccgaccaggagtcgccccgggagaacgtggacgaggcggtg
aacggggagcccagccccgcggggtcaccgggcgccggtcgtaaggccaaggccagccag
gcggcgacgctgccggcgaagagccagcaggacggcgccacctgcctgctggaggccttc
ctgcaccgcaaacacgagtgggagggccacaacaagaaggcctccaacaggtcctggcac
aacgtgttctgtgtgatcaaccagcaggagatgggtttctataaggaccagaagagcgcg
gcgcagggcgtcccctaccacagcgagatccccgtcagcctgaaggaggcgctgtgcgag
gtggcgctcgactacaagaagaagaaacacgtcttcaaactcaagctcaccgacgggaac
gagtatctcttccaagccaaagacgacgaggagatgaccgcctggatctcggccatcgcg
gcggcgggctccaggccggaggtgacgcccagcagccacagcacgccggcccccgccgcc
cgcgcccagacgctgccggccaccgtggcggcctccaccgccgagtccagcccgggcaaa
cgggagaaagacaaggagaaacgcttcagtctgttcagcaagaagaagtag
DBGET
integrated database retrieval system
