Poeciliopsis prolifica (blackstripe livebearer): 129354327
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Entry
129354327 CDS
T09758
Symbol
rnf4
Name
(RefSeq) LOW QUALITY PROTEIN: RING finger protein 4
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129354327 (rnf4)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129354327 (rnf4)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129354327 (rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf_RING_Vps8
zf-rbx1
Prok-RING_4
zf-C3HC4_4
Rtf2
zf-RING_6
zf-UDP
TRAF3_RING
zf-RING_11
zf-RING_16
zf-P11
PD-C2-AF1
zf-RING_10
zf-ANAPC11
Zn_ribbon_6
zf-RING_Vps41
HypA
IBR_1
Motif
Other DBs
NCBI-GeneID:
129354327
NCBI-ProteinID:
XP_054879803
LinkDB
All DBs
Position
Unknown
AA seq
187 aa
AA seq
DB search
MSSSAQRKQRPAGSSLVSRTRTKTGRAASSRTRRAAGAGDPAPPTEPIDVMDGAEDGVEE
VVDLTCEGSESAVVDLTTNNESVLLVDEGPPGESYVLSSDEDEDAPTVIQAAISSTAHTS
RLTPGLISCPICLDLYSEIVESGRLVVSTKCGHVFCSQCLRDALTSSHTCPTCRKRLTSR
QYHPLYI
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctcggctcagaggaagcagcggcccgctggaagctctttggtctccagaacc
agaaccaagaccggcagagcggccagcagtcggacccgcagggcagccggcgccggagac
cccgccccccccacggagcccatcgacgtgatggacggcgccgaggacggtgtggaggag
gtggtggacctcacctgcgagggatcagagtccgctgtggtcgacctgacgaccaacaac
gagtctgtgctgctggtggatgaagggcctccaggtgagagctatgttctcagcagtgat
gaagatgaagatgcgcccactgtcattcaagctgccatcagctctactgcacacacatcc
aggttgactccaggtctcatcagctgtcccatctgtctggacttgtactccgagattgta
gagagcgggcgattggtcgtttccactaagtgtggccacgtgttctgcagccagtgtctg
agggacgctctgacatcatcacacacctgccccacctgcagaaagcggctcacctcacgc
cagtaccaccctctttacatctga
DBGET
integrated database retrieval system
