Poeciliopsis prolifica (blackstripe livebearer): 129354415
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Entry
129354415 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-13-like
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129354415
Transcription factors [BR:
pprl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129354415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
129354415
NCBI-ProteinID:
XP_054879864
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MVEPSPSALHLLSGGDVRMADIGVKVEQEECVGAKTNSEHPRTLHDWSASQPLETRQLTP
PLSRSPSEGSPGKEPPHKQSPMGVKEAGIHERSEGPAKIKEVMPTIEKLLNADWKEKLLD
KSSVGAGQLKGTPESLAEKELQLLMMINQLSGLREQLLGAHSEQRNMAALLLEKQQQQME
LARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFHPNTQTLPVSSDPPMTL
PLQPIPCKPTVDYPMQLLPNSHHTPIKRSSSSFRQEASQPLNLTSKPKGMELGKTSSPLS
RELGSAGSMQGAYRPREVSRSPPRPALSFLGDGDVVTQAIHDAQQLLRSHSSGGRDRDRE
RDGSGKMEYKGSPRAEKISHCERGEERHGEEHLSSDSEGALPVSVPGSYSETRPASSTGH
IKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQ
HLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKSRRQEQRATYTHSQSDPQQIQYSQS
DQYPAGGSISVPGLPFHPHCWSITCRRPRPLHTGLRTGPHPPHCPGTGTGRERESDCPTA
KEKKATWGRGVRGNWCCSQTDQVGPGGSLGGLSARSEETERKMNRTSASDVALGFEAIRI
QILDD
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggttgagcccagcccttcagctctgcacctcctctccggtggggatgtacgcatggca
gacatcggcgtcaaagtggaacaggaggaatgcgtcggagccaaaaccaactcggagcac
cccagaactctgcacgactggtcagcaagtcagcctctagagacgcgccagctgacccca
ccgctgtcgcgctccccttcagagggctctccaggaaaggagccgcctcacaagcaaagc
cccatgggagtgaaggaagccgggattcacgagcgatcagaggggccagccaaaattaag
gaagtaatgccgaccatcgagaagctgctgaacgccgactggaaggagaaacttctggat
aaaagctcagtcggtgcaggacaactaaaaggcaccccggagtctctggcggagaaggag
ctgcagctgctgatgatgatcaaccagctgagcggcctcagggagcagctgctgggggcc
cactcagagcagaggaacatggccgccctgctgctggagaagcaacagcagcagatggag
ctggcccggcagcagcaggagcagatcgccaagcagcagcagcagctgatccagcagcag
cataagatcaacctgctccagcagcagatccagcaggtgaacatgccctacgtgatgatc
ccggctttccaccccaacacccagaccctccccgtctcctcagaccccccgatgacattg
cctctgcagcccatcccctgcaagccgacagtggactaccccatgcagctgctcccaaac
agccaccacacgcccatcaagaggagcagcagctccttccgccaggaggcgagccagccg
ctgaacctcacctccaagcccaaggggatggagctggggaagacgtccagccctctgagc
cgggagctgggatcggcgggatccatgcagggtgcctacagacccagagaggtgtcccgc
agcccgccgcggcccgccctcagtttcctaggagacggcgacgtggtcacccaggccatc
catgatgcccagcagctcttgaggagtcacagcagcggcgggagagacagagacagagag
agagacggttccggaaaaatggaatataaaggttctcctcgtgcagaaaaaataagtcac
tgtgagcgcggtgaagagaggcacggcgaggagcacctcagcagtgactctgagggggca
ttgcccgtctccgttcccggcagctactctgaaacgcggcccgcatcctctaccggccac
ataaagagacccatgaacgccttcatggtgtgggccaaggacgagcgcaggaggatcctc
caggctttcccagacatgcacaactcctccatcagcaagatcctaggctccaggtggaag
tccatgtccaaccaggagaagcagccgtactatgaggagcaggccaggctgagccggcag
cacctggagcgttaccccgactacaagtacaagccccgacccaaacggacctgcatcgtg
gagggccgaaggctgagggtgggcgagtacaaagccatgatgaagagccgcaggcaggag
cagagggccacctacacacacagccaatcagatccgcagcagatccagtactcccagagc
gaccagtacccagccggcggctccatctccgtcccaggcttgccgtttcacccgcactgc
tggagcattacctgccgcaggccccgccccctgcacacaggtctgaggaccgggccacac
ccaccccactgcccagggacagggacagggagagagagagagagcgactgccctacagcg
aaggagaagaaagcgacgtgggggagaggagtgagggggaactggtgctgctcacagact
gatcaggtcgggcccggtgggtctctggggggcctctcggcccggagcgaagagacggag
aggaagatgaacagaacttcagcttcagatgtcgctcttggttttgaggcaatcagaatc
caaatcctggacgactga
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