Poeciliopsis prolifica (blackstripe livebearer): 129354528
Help
Entry
129354528 CDS
T09758
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprl03021
]
129354528 (taf1b)
Transcription machinery [BR:
pprl03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
129354528 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF5816
Importin_rep_4
Motif
Other DBs
NCBI-GeneID:
129354528
NCBI-ProteinID:
XP_054879982
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MDEEEADEYKEPCNQCSAVDWGISDEGRFYCRSCHNVIERTREVVDMPFAGNANRISRIT
SQSGIRKTECGYVWMLCEGFQFILQNQADALLRLGVTPGFKDDVLCQMWRIYLQKTQQGY
TRNPIRSSRFRGAALDTDLDSAAESVLSDTFTDSGSVLNSSAGSNAESSSDWLGSDYSST
STSASLKWSRNLMTMKTTLVLIHLALVWSREALTLSDLLRLVKEGHVPYVTAYEDLPEEM
KLHGPDALLFHVERIPSHRSVHKEAQVLVQLLQLPAFPPVVPEALLHPAPLSLRYLTDAN
LPDELHRWVCVLMDRAGMADPKRHTLDGESRPVLPRYDLQAAALIIVTMKVMFGLDDHTE
WDLSNKTGSHDNTGDLFSFRKWYKLVQAAFMEAQQRRNQDMARKQWKGKKLFFVDKKDRL
YVTKRRRISENIQMCLKRLSSCPAGVHYDGPSSFQFCWSDEDGSDGPSLHHTKLDSIVSL
SNGFMTPWNHNYWHPPLRRCNPRSCTSHYPNMEPTLPRSFVWLLQLFSFMLDVEAWYLFD
EVLEVERRVFATRMPHIGQRPETRKWLRTEETNTSQKPRS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaggaagcggacgaatacaaggagccctgcaatcagtgttcagctgtggac
tggggcatctcagacgagggtcgcttctactgcaggtcctgccacaatgtcatcgagaga
accagagaggtggtggacatgccgtttgctggcaacgccaacagaatttcccggatcacc
agtcaatccggaatcaggaaaacggagtgcggctacgtctggatgctgtgcgaaggtttc
cagttcatcctgcagaaccaggccgacgctctcctcagactgggagtcactcctgggttt
aaggatgacgttttgtgtcagatgtggagaatttatctgcagaagacccagcagggatac
accagaaacccaatcaggagttcaagattcagaggggctgcgttggacacggacctggac
agcgccgcggaatcggttctgtctgatactttcaccgactccgggtcggttctgaacagc
tccgctggctctaatgcagagagctccagtgattggctgggatcggactacagcagcaca
agcacctcggcgtcattgaaatggagccgcaacctgatgaccatgaagacgactctggtt
ctgatccacctggctctggtctggagccgcgaagctctgacgctcagcgacctgctcagg
ctggtgaaagaaggtcacgtcccgtatgtgacggcgtacgaggatctcccagaagagatg
aagctgcatggtcccgatgctcttcttttccacgttgagaggatcccgtctcaccgctcg
gtccataaagaagcgcaggttctggtccaattactgcagcttcctgcttttcctccagta
gtcccagaagcattgctccacccggcgccgctcagcctgcgctacctgaccgacgccaac
ctccccgacgagctgcacaggtgggtctgcgtcctgatggaccgcgcaggtatggcggat
ccgaagcgccacacgttggacggcgagtcgcgtcccgtcctgccgcggtacgacctgcag
gccgccgcgctcatcatcgtcaccatgaaggtgatgtttggcctggacgatcacaccgag
tgggatttatcgaacaagactggttcccatgacaatacaggagacctgttcagcttcagg
aagtggtacaaactggttcaggctgctttcatggaggcccagcagaggaggaaccaggac
atggccaggaaacagtggaaaggaaagaaactgttcttcgtggacaagaaagacagactt
tacgtgacaaagaggagaagaatctcagagaacatccagatgtgtttaaagaggctgtct
tcttgtccggcgggcgtccattacgacggtccttccagcttccagttctgctggagcgac
gaggacggatccgacgggcccagtctgcaccacaccaagttggatagcatcgtctctctg
agtaacggattcatgactccctggaaccacaactactggcatccgccgctgcgacgctgc
aacccccggagttgcaccagtcattaccccaacatggagcccacgctgccgcgctccttc
gtctggctgctgcagctcttctccttcatgctggatgtggaggcctggtatctgttcgac
gaggtgctggaggtggagaggcgcgtctttgccaccagaatgccgcacattggtcaacgt
cccgagaccaggaagtggctcaggactgaggaaacaaacacatcgcaaaaacccagaagc
tga
DBGET
integrated database retrieval system
