Poeciliopsis prolifica (blackstripe livebearer): 129354531
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Entry
129354531 CDS
T09758
Symbol
sox11b
Name
(RefSeq) transcription factor SOX-11b
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129354531 (sox11b)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129354531 (sox11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
PPP4R2
NOA36
Nop14
LRS4
RXT2_N
Pox_Ag35
Radial_spoke
Motif
Other DBs
NCBI-GeneID:
129354531
NCBI-ProteinID:
XP_054879985
LinkDB
All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MVQHREHPGAGTTKESREATDTEEGELLAASACSVVPLKPDWCKTASGHIKRPMNAFMVW
SKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDTEKIPFIREAERLRLQHMADYPDYKYR
PKKKPKTEGCAFPAGKPSAQSPVKSTVRPVSKNPAAAKKLSKLKAGKAAAASGRGGGHLP
PPDHRYRYMLSAGFKTVKREFTDDEEDDDDDDDDDEDSEEEFKVEEEEEEEEPSRFRLAK
IPSEPQFESSGRLFYSFKNITRQGGAASAYPASLSPASSSRSGSTSSCCGEDLDDLPAER
ADLPLGFLGDPWASSCSAAAGNLSLSLVDKDLDSCGSEGSLGSHFEFPDYCTPELSEMIA
GDWLDFSDLVFTY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggtccagcacagggaacaccctggagcgggaaccaccaaggagtcccgcgaggcgacg
gacaccgaggagggtgagctgctggcggcttcggcctgcagcgtcgtgccgctgaagccg
gactggtgcaaaacggcgtcgggtcacataaagcggcccatgaacgccttcatggtctgg
tccaagatcgagcggaggaagatcatggagcagagtccggacatgcacaacgcggagatc
tccaagcggctcgggaagcgctggaagatgttgaaggacacggagaagatcccgttcatc
cgggaggcggagcggctgcggctgcagcacatggccgactacccggactacaagtaccgg
cccaagaaaaagcccaagaccgagggctgcgcgttcccggcggggaagccatccgcccag
tctccggtgaagagcaccgtgaggccggtgagcaaaaaccccgcagccgccaagaaactg
tccaaactgaaggccgggaaggcggcggccgcatccggccgcgggggcggccacctgccg
ccgccggaccaccggtaccggtacatgctgagcgccggcttcaagaccgtcaaacgggag
tttaccgacgacgaggaggatgatgatgacgatgatgatgatgatgaagactctgaggaa
gagttcaaagtggaggaggaagaggaggaggaggaaccgtcccggttccgcctggccaag
atcccgtccgagccgcagttcgagtcctccggccggctcttctacagcttcaagaacatc
acccggcagggcggcgcggcctccgcctacccggcctccctgtcccccgcatcctcctcc
cgctccggctccacgtcctcctgctgcggggaggacctggacgacctgccggcggagcgg
gccgacctgccgctgggcttcctgggcgacccctgggcctcgtcctgcagcgcggcggcc
gggaacctcagcctgtccctggtggacaaagacctggactcctgcggcagcgagggcagc
ctgggctcccacttcgagttcccggattattgcaccccggagctcagcgagatgatcgcg
ggcgactggctggacttctcggacctggtcttcacgtactga
DBGET
integrated database retrieval system
