Poeciliopsis prolifica (blackstripe livebearer): 129354557
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Entry
129354557 CDS
T09758
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a
KO
K14966
host cell factor 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03083
Polycomb repressive complex
pprl04980
Cobalamin transport and metabolism
pprl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129354557 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
129354557 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129354557 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprl01009
]
129354557 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129354557 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
pprl03029
]
129354557 (hcfc1a)
Protein phosphatases and associated proteins [BR:
pprl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129354557 (hcfc1a)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
129354557 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
129354557 (hcfc1a)
MLL-HCF complex
129354557 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
129354557 (hcfc1a)
Mitochondrial biogenesis [BR:
pprl03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
129354557 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
129354557
NCBI-ProteinID:
XP_054879998
LinkDB
All DBs
Position
Unknown
AA seq
1711 aa
AA seq
DB search
MSAPGSAVSGTTPSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
PGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTTRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVGGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPATSATPSQ
PINSPKSPAPAAAAPSAQSLQQTAVLKVAAQQAATGASVVTVRPSQPGKSPVTVTSLPPG
VRMVVPTQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPASGGTVLNVPAGATILKTVAV
SPGTTTVKVASPVMVSNPATRMLKTAAAQVGTATASSPTTTRPIITVHKSGAVTVAQQAQ
VVTTVVGGVTKTITLVKSPLTMGSSGTLISNLGKMMSVVQTKPVQTSAVTGQASTNPLTQ
IIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPTTTKQGTTII
KTIPMSAIMTQPGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLSTAAGQQGLT
QVVLKGAPGQPGTILRTLPMSTVGGVRLVTPVTVSSVKPTVTTLVVKGTTGVTTLGTVTG
TVSTSLAGATADSSSASLVTPITTLANIATLSSQVISPAAITVSAAQTSLTSTSTLPSST
MTVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAGATGDGSGTVTLVCS
NPPCETHDTGTTNTATTSSATIGAGQVCSNPPCETHETGTTNTATTSSATIGAGQVCSNP
PCETHETGTTNTATTASSNMSTLRVCSNPPCETHETGTTNTATTATSNMGGAQQVCSNPP
CETHVTGTTNTATQASSSMNAGETGTVQSSQSNQPSETHESGASDTPSASTSSVEEDQSS
TATGQIQRVCSNPPYETHETGTTNTATTATCNMETGEGTAAQQTEEGAEGASTTEEAATT
AATSVTTTSQGRAITTVTQSTPAPGPSVPSISSITEGVSTAASSTEEPMQTEEPASAEAA
PAEEPAAAMETQAEGEAAAATALNLPSELMSEAQGTTLMVTGLSDEELAVTAAAEAAAQA
AATEEAQALAIQAVLQAAQQAVMNEGDGSGESQQPTNIPIMLTQQELAALVQQQQQLQEA
QAAAQQASVDTSMPTEGLAPADSLNDPSVESNGHNEMAASVTSAVASLLPRTTAETLAPS
STFAASISVASPAKLQAAATLAEVANGIEGEKQAPQPAPVKPVVKKENQWFDVGIVKVTN
MVVTHFYVPGDDSQGDDDSGAVPDYSQMKKMELQPGTAYKFRVAGINACGRGTFSEISAF
KTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQTAEAKASTPA
QLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESG
KDATSAKPAPKRPGTSPDTKTTGPKKARTDQ
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggttccgcggtgtctgggaccactccgtcggttctgcagccgcgatgg
aagcgggtcctcgggtggtccggtccggtccctcggcccaggcacggacacagagctgtg
gctataaaggaactgatggttgtttttggaggtggaaacgaaggaattgttgatgaacta
catgtatacaacacagcaacaaaccagtggtttatcccagcggtccgtggtgatatccct
ccaggttgtgctgcatatggttttgtatgtgatggaacacggttgctggtttttggtggc
atggtggaatatggaaaatacagcaatgatctctatgaactacaggccagcagatgggaa
tggaaaaaactgaaagccaaaaatccaaaaaacggcccaccgccttgtcctcggctcggt
cacagcttttcgctcgttggcaacaaatgctacttgtttggcggactggccaatgatagt
gaagaccccaaaaacaacattccccgatacctgaatgatttgtacactctcgagcttcgt
cctgggtctagcgtggtcgggtgggatattccaatcacgtatggtgtcctgcctcctcct
cgcgagagtcacaccgctgtggtgtacacagaaaagacgaccaggaagtcacgcttgata
atctatggaggaatgagcggttgtcgccttggagatctatggacgcttgacatagatact
cttacttggaacaaaccttcagtcggtggtacggcacctcttccacgaagtcttcactcc
gccaccacaatcacaaacaagatgtatgtttttggtggatgggttcctttggtaatggat
gacgtcaaagtggccacacacgagaaagaatggaaatgcacaaacacactcgcttgccta
aatctcgactccatgtgttgggaaacagttttgatggataccctggaggataacatcccc
agggcccgtgctggccactgtgccgtggccatcaattccagactgtatgtctggagcggc
cgtgatgggtatcggaaagcatggaacaaccaagtgtgctgtaaagacctttggtacctg
gaaacagagcggccccacgctcctgccagggtccagttagtccgtgccaacacaaactct
ctggaggttagctggggtgcagtctccaccgccgacacgtacctgctgcagctgcagaag
tacgacatccctgcgaccccagcggcagcctcgccagccacgagcgcaacgccttcgcaa
ccaatcaactctccgaaaagccctgcaccggccgctgcagcaccctccgcgcagagttta
caacagacagctgttttaaaggttgcagctcagcaggctgccacaggcgcatctgttgtc
acagttcgcccgagccagccggggaaatcccccgtcaccgtgacgtcccttcctccaggt
gttcgaatggtagtgcctacccaaaccacccagggatcaccaattggaagcagccctcag
atgagtggcatggcagctttagctgctgcagctgcagccacacagaagatcccacccgct
tcagggggcactgttctcaacgttccagcgggtgccaccatcctcaaaacagtggccgtc
tccccaggcaccaccacagtcaaagtggcttctcctgtaatggtcagtaacccagccacc
cgcatgctgaagacagccgcggcccaggtaggcactgcaactgcgtcctctcccaccacc
accagaccaatcatcactgtgcacaagtccggggctgtcacagtggctcagcaggcccag
gtggtcaccactgtggtgggaggagtcaccaagaccatcaccctggtcaagagtccgctc
accatggggagcagcggtactttgatctccaaccttggcaagatgatgtctgtggtgcaa
accaagccagtgcagacatcagctgtcacaggccaggcttctactaaccctctcacacag
atcatacagacaaagggtcccctcccagccggcaccatcctgaaactggtgacttctgca
gacggcaagcccacaacaatcatcacaacgtcccaggccggaggcacaggaaacaagccc
acgatcctcaacataagtggcgtgtcgcctactactaccaagcagggaaccaccatcatt
aagaccatccccatgtcggccatcatgacccagcctggagccacaggtgtgacaagcagt
gcaggcatgaaaacaccaataacgatccttaccaccaaggtaatgaccactggaacgcct
ggtaaaattattactgctgtgcccaagctgtccactgcagctggacagcagggattgacg
caggtggtattaaagggggctccaggacagccgggcactattttgcgtaccttgcccatg
agcacagtaggcggtgttcgtctcgttacgccagtgacggtctcctctgttaagcccact
gttaccacgctggttgtcaagggaactactggagtcaccactcttggtaccgtcactggg
acggtgtccacaagcttggcaggagccacggctgacagctccagtgcctccctggtgacg
ccgatcaccacgctggcgaacattgctacactgtccagccaggtgatcagcccagccgcc
atcaccgtctcggctgctcagaccagtctgacttctacttcaactctgccctcctccacg
atgacagtgcagaaccagcccacccaggttaccctgattacaacccccagtggtgttgaa
gcccagccagtccaggatcttcccgtgtccattctggcttctccgacctctgaacagccc
agctccactgaggcaggagcaactggagacggttctggtaccgtcaccctggtctgctcc
aacccgccctgcgagacccacgatacaggaactaccaataccgccaccacttcctccgct
acaatcggagccggacaagtctgctccaacccaccctgtgagacccacgagacgggaacc
accaacacagcaacaacttcctccgctacaatcggagccggacaggtctgctccaacccg
ccctgcgagacccacgagacgggaaccaccaacacggctacgacggcttcttcaaacatg
tccacattacgcgtgtgctccaacccgccctgcgagacccacgaaacggggacgacaaac
acggccaccacagcgacctccaacatgggaggagcccaacaggtgtgttcaaatcccccc
tgtgagacccacgtgacgggcaccaccaacacagcaacacaagcttcctccagcatgaac
gccggcgagacgggcaccgtgcagagctctcaatcaaatcaacccagcgaaactcacgaa
tcaggggccagcgacactccgtccgcatccacctccagcgtagaggaggaccagagcagc
acagcaacgggccagatccagagggtctgctccaacccgccgtatgaaacgcatgagact
gggaccaccaacacggccactactgctacctgcaacatggagaccggtgaaggaacggcc
gcccagcagacagaggaaggagcagaaggagcaagcaccacagaggaagctgctaccact
gcagctactagcgtaactacaaccagccaaggcagagccatcaccacagtcactcagtcc
acaccggcccctgggccctcagtaccgtcaatttcctcaatcacagaaggagttagcact
gcagccagcagcacagaggagccaatgcagactgaagaacctgcatcagcagaagctgca
cctgctgaggagcctgctgcagccatggagacacaagcagaaggagaagcagcagctgca
acggccttgaacctgccctcggagctgatgtctgaggcccaggggaccacgctgatggtg
acggggctgtcggacgaagagctggccgtgaccgccgccgctgaggctgctgcccaggct
gcagccacagaggaggcccaggccctcgccatccaggctgtcctgcaggcagcgcagcaa
gccgtaatgaatgaaggtgacggttctggggaaagccagcagcccaccaacatccccatc
atgctgacccagcaggagctggccgcactggttcagcagcagcagcagctacaggaagct
caggccgccgcgcagcaggcctccgtggacaccagcatgcctaccgagggactcgctccc
gccgacagcctcaacgacccgtcagtcgaaagcaacggacacaacgaaatggctgcctcg
gtcaccagcgccgtggcatcccttctaccacgtaccactgctgagactctggctccatca
agtacgtttgcagcgtctatatcagtagcaagtccggccaaactgcaggcggcagccact
ctggcagaggtggccaatggcatcgagggagagaaacaagcccctcagcccgctccagtg
aagcctgttgttaaaaaggagaaccagtggtttgatgtggggattgtaaaagtgacaaat
atggtcgtcactcacttctatgtgccaggagacgattctcaaggagatgacgactctggc
gccgtaccggactacagtcagatgaagaagatggagctgcagcccggcacggcgtacaag
ttccgcgtggcggggatcaacgcctgcgggcgtggaacgttctctgagatttctgctttc
aagacctgcctacccgggttcccaggagccccgtgtgccatcaaaattagcaagagccca
gatggcgcccacctgacctgggagccgccttcggtcacgtcagggaaaatcatagagtac
tcggtgtacctggccatccagagcagccagacggccgaggccaaggcctccactccggcc
cagctagccttcatgcgagtgtactgcggacccaacccctcgtgcttggtgcagtcgtcc
agcctctcaaacgctcacatcgactacacgactaaaccagccatcatcttccgcatcgcc
gcccgcaacgagaagggctatggtcccgccactcaagttcgatggctacaggaatctggt
aaagacgccacatctgcaaaacctgcccccaaaagacccggcacctctcctgataccaag
actactggtccaaagaaagcaaggacggaccagtga
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integrated database retrieval system