Poeciliopsis prolifica (blackstripe livebearer): 129354666
Help
Entry
129354666 CDS
T09758
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pprl03009
]
129354666 (ddx10)
Enzymes [BR:
pprl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129354666 (ddx10)
Ribosome biogenesis [BR:
pprl03009
]
Eukaryotic type
90S particles
Helicases
129354666 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
PAS_11
Motif
Other DBs
NCBI-GeneID:
129354666
NCBI-ProteinID:
XP_054880119
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MKEKKQNPSRKKPKAAHRRGSADPVKCFEKWKNKYMKGRDRLKQRRTQRRKPEWQLEREY
IKSLVSRYGDINTTDVCKFSDFPISKKTLLGLQEAQYRQPTEIQKQTIGPALRGRDVLGA
AKTGSGKTLAFLVPVLECLYRQQWSSMDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA
GLVIGGKDLKSESERISRTNIVICTPGRLLQHMDETASFYASSLHMLVLDEADRILDMGF
ADTLNAIVDNLPKSRQTLLFSATQTRSVKDLARLSLKDPEFVWVHEKAKFSTPATLEQSY
VVCELHHKVNMLYSFVRSHLKKKIIVFFACCKEVQYLFRAFCRLRPGIPILALHGKQQQI
KRVEVYNNFVKKQSAVLFATDIAARGLDFPAVHWVLQFDCPEDADTYIHRVGRTARYKEG
GEALLLLLPSEEKAMLAQLQEKKVPINQIQVNPEKVHSVQQKLEAFLAQEMEQKERAQRC
FVSYLRSVYLMKNKQVFDIFELPIRQYALSLGLAVCPRVRFLSKAHAQKAENEDEEESDE
EEELQSFKVQLSMKVPCEVVEHDTEENVDESSKALHGDISEDEDDIRDLELLTVKRRDVF
ELSEPECVEDTSQGPNNTRKKTKFKKTKKLLNRNFQINTKITFNEEGEAVQLWPPVQQTV
TAEDEEDDVLGINVAKARDRLRHEDQEFDKQEYRRKVQAVHRNKRLKAKETRREASKRQR
RSDEENLAYLACHSEGEFDSSILPDPDQLHSSEEEEEDYAKQHSCKDKPLAMTRKKGKQL
NDEHIGLDTGLSLAEDEELVLHLLREPK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaagaaacagaatcccagtagaaagaaaccaaaagccgctcacagaagaggg
agcgcggatccagtaaaatgcttcgagaagtggaagaacaagtacatgaaggggagagac
cgtttgaaacaaaggagaacgcagaggagaaaacccgaatggcaactagagagggagtac
atcaaaagtctggtgagcagatatggtgacatcaacacgacggatgtttgtaagttttcg
gactttccgatctcgaagaagaccctgctgggtctccaggaggctcagtatcgtcagccc
acagaaatccagaaacagacgatcggccccgctctgcgtggcagggatgtccttggtgct
gcgaagactggttccggaaaaactttagccttcctcgttccggtgcttgagtgtctgtat
cgtcagcagtggagctcaatggacggtctcggtgtcctcatcatatcaccaaccagagaa
ctcgcctatcaaaccttcgaagttctccgcaaagtaggcaaaaatcatgacttttccgca
gggctcgtcatcgggggtaaggaccttaagagcgagtcagagcggatatcccgcaccaac
atagtgatatgcaccccggggcggctgctgcaacacatggacgagacagcctccttctat
gctagcagcttgcacatgcttgtcctcgacgaggcggaccgcatcctagacatgggcttt
gcagacacgctcaatgccatagtggataacctacccaagtcacgacagaccctgctgttt
tccgccacacagaccaggagtgtgaaagatctggcccgtctgagtctcaaggatccagag
tttgtgtgggttcatgagaaagccaagttcagcacaccggccaccttggagcagagctac
gtggtgtgtgagttgcaccacaaagtgaacatgctctattcctttgttagaagccacctg
aagaagaagattattgtgttctttgcctgctgcaaagaggttcagtatctgtttcgtgcc
ttctgtcgtctaagacctgggattcccatcctggcgctgcatgggaagcagcagcaaata
aagagggtggaagtctacaacaattttgtcaagaagcagagtgctgtcctgtttgccact
gatattgctgcgagaggcctggacttccctgctgtccattgggtgctgcagtttgactgt
ccagaggacgcagacacctacatccacagggtaggccgcactgctaggtacaaggagggt
ggagaagctctgctgctcttgctcccctctgaagagaaagccatgctggcccagcttcag
gagaagaaggttcccatcaatcagatccaagtgaatccagaaaaagtgcactctgtgcag
cagaagctggaggccttcctggctcaggagatggagcagaaagaaagagcccagagatgt
tttgtttcgtatctgcgctcagtctatctaatgaaaaacaaacaagtctttgacatcttt
gagctgccgattaggcagtatgctctatctctgggccttgctgtttgccctagggtgcgc
ttcctcagtaaagcccatgcacagaaagcagagaatgaggatgaggaggaatctgatgaa
gaggaagaactccagagctttaaggttcagctgagtatgaaggtgccctgtgaagttgtt
gaacacgacacagaagaaaatgtggatgagtcctcaaaagcacttcatggtgacattagt
gaagatgaagatgatattcgggacttagaactgctgactgtcaaaagaagggatgtcttt
gagctgtcggagccagagtgtgtggaggacacttcccaaggcccaaataacaccagaaag
aaaacaaagttcaaaaagaccaaaaagctcttaaacagaaacttccaaatcaataccaaa
attacttttaatgaagaaggagaagctgtgcagctttggcccccagtgcagcaaacggta
actgctgaggatgaggaagacgatgttttaggcatcaatgtggcaaaggccagagacagg
cttagacatgaagaccaggagtttgacaagcaagagtacagacgcaaggttcaagctgta
cacagaaataagaggctcaaggccaaagagaccaggagggaggcaagtaagcggcaacga
aggtctgatgaggaaaatctagcatacttggcctgtcacagtgagggtgagtttgactcc
agcatcttgccagaccctgatcagttgcactcatcagaagaagaggaggaggattatgct
aaacaacacagctgcaaggacaagcctttagcaatgacaagaaagaaaggaaagcagctg
aatgatgagcatattggcctggacactggtctttcactggctgaagatgaggagctggtt
ttacatctgctgcgtgaaccaaagtag
DBGET
integrated database retrieval system
