Poeciliopsis prolifica (blackstripe livebearer): 129354737
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Entry
129354737 CDS
T09758
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4 isoform X1
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprl01002
]
129354737 (usp4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129354737 (usp4)
Enzymes [BR:
pprl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129354737 (usp4)
Peptidases and inhibitors [BR:
pprl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129354737 (usp4)
Ubiquitin system [BR:
pprl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129354737 (usp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
129354737
NCBI-ProteinID:
XP_054880197
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MMAEGGGPESGSAADSDTEPVAAQMPIPSIENQKQSIGALLKTTLKKGDEWYLIDSRWFK
QWKKYVGFDSWDMYNVGERSLYPGPIDNSGLFSDQETQALKEHLIDELDYVLVPTEAWNK
LVSWYSCLEGQRPIVRKVVEHGMFVKHCKVEVYLLELSLCENDNMDNVITRHFSKADTID
TIEKEMRTLFNIPSEKETRLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIERKNEDGT
WPRQASLPKSSATPSRNFTTSPKLSSNSSATVSPTVTNGDSSGSPGYALNNSTSSNNRFG
GYNSYSSSYNYREPQSQPGLCGLSNLGNTCFMNSALQCLSNVSPLTEYFLTDQYEAEINR
ENPLGMRGEIAEAYADLVNQMWMSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFL
LDGLHEDLNRVKKKPYLALRDAEGRPDDIVAKEAWKNHRLRNDSIIVDIFHGLFKSTLVC
PECSKVSVTFDPFCYLTLPLPMKKDRTMEVFLVQSDPQSKPTQFRVVVPKLGAVMDLCSA
LSRLCGIPPEKMVVADVYNHRFHKIYRRDDALNQIMEKDDIFVYEVQEEDSERMNLPVYF
RERHSKHMGSSSSTLLFGQPLLISVPRHNLLADVLYDKILERIRRYIKQQHSPNSESRAS
ASATLSSCSQTPECSTSSTLNASLGGCGSPQSDGASCSASSSNGSNHSGTCNEANGLYDG
EEEAMDHQVSPEPENGPSEEEEESSDLENGTKGNAAKLFTFSIVNSYGTVNISPLPCDGN
VLKLNPHSTVAIDWDTESKKLFYDEQEAEAYEKHDSMLQPQKKKTTVALKECIELFTTME
TLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTLVDFPIRDL
NMSEFVCDPKAGPYVYDLIAVSNHYGGMGGGHYTAYGKNKMDGKWYYFDDSSVSSASEDQ
IVTKAAYVLFYQRRDEDSPTKADPPASLGGATESGDDNMDTN
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgagggaggcggacccgaatcgggcagcgcggcagactctgacacagagccg
gtagccgcacagatgcctatcccttcaatagaaaaccaaaaacagagtattggggcactt
ttgaaaacaactttaaaaaagggcgacgaatggtatcttatagatagtcgatggttcaaa
cagtggaaaaagtatgtgggatttgacagctgggatatgtacaatgttggggaacgtagc
ctctatccaggaccaattgacaactctggcctgttctcagaccaggagactcaggccctg
aaagagcaccttatagatgagttggactatgtcctcgtacccactgaggcatggaataag
ctggtcagctggtacagctgccttgagggccagagaccaatcgtcagaaaggtggttgaa
catggcatgtttgtgaagcactgtaaggtggaagtttatctgcttgaactcagcctatgt
gagaatgacaacatggataatgtcatcacacggcatttcagtaaagctgataccatagac
actatagagaaggagatgcggacgttgttcaatatcccttcagagaaggagactcgactt
tggaacaaatacatgagcaacacttatgagcagctgaacaagccagacagcactgtacag
gatgccggtctcttccagggacaggtgcttgtgattgaacgcaagaatgaggacggcaca
tggcccagacaagcttcgcttcccaagtccagtgcaactccatctaggaattttactacc
tcccctaaactttcctcaaattcatcagctactgtatccccaacagtaaccaatggtgac
agtagcggtagccccggatatgctctgaataacagcacgtcctctaacaacagatttggg
ggatataattcatatagctcctcctataactacagagaaccacaatcgcagcctggcctg
tgcggtctcagtaatctgggcaatacatgcttcatgaactctgctctccagtgcctgagc
aatgtgtctccactcacagagtacttcctcacagaccagtatgaagcggagattaaccga
gagaatcccctgggaatgaggggagagatcgctgaggcctacgcagacctggtgaatcag
atgtggatgagccgcagcagttacgtggccccgcgtaccttcaaaacccaggtgggccgc
ttcgctccacagttttccggctaccagcagcaggactctcaggagttgttggccttcctg
ctggatggactccatgaagatctgaaccgtgtcaagaaaaagccttacctggccctgaga
gacgcagagggtcgaccagatgatattgttgccaaggaagcctggaaaaaccaccgcttg
cgcaatgactccatcattgttgacattttccacggcctctttaagtctacattagtgtgt
ccagagtgctccaaggtgtctgtgaccttcgaccctttctgctacctcacgctgcctctc
cctatgaaaaaggaccggaccatggaggtgtttttagttcagtcggacccccagtccaaa
cccactcagttcagagtggtggtccccaaactgggcgcagtgatggatctttgcagcgcc
ttatccaggctctgcgggattcctcctgagaagatggtggtagcagacgtttacaatcac
agatttcataaaatttacagacgagatgatgccctcaatcaaatcatggaaaaagatgac
atttttgtatacgaggtccaggaggaggacagcgaaaggatgaacctgcctgtgtatttc
agggagcgccactccaagcacatggggagctcctctagcaccttgttgtttggccaacct
ttactcatctccgtgcccagacacaacctgttagctgacgttctttacgacaagatcctg
gaaaggatcagacgctacatcaagcaacagcacagtccaaatagtgaaagcagagcttca
gcctccgccactttgtccagctgcagccagacacctgaatgttccacatcgtctaccctc
aacgccagcctggggggctgcggcagcccccagtcggacggagcctcctgcagcgccagc
tccagtaacggtagcaaccactcaggaacctgcaatgaagctaatgggctgtatgatggt
gaagaggaggccatggatcaccaggtgagtcctgagccggagaacgggccgtctgaggaa
gaggaggagagctcagacttggagaacggcactaaaggaaacgcagctaagctcttcacc
ttcagcatagtcaactcttatggcaccgtcaacatcagcccgctgccttgcgatggaaat
gtcctcaaacttaacccacattccactgtggcgatcgactgggacacagaatcaaagaaa
ctgttttatgatgagcaggaagcggaggcctatgagaagcacgacagcatgctgcagcct
cagaaaaagaaaacaaccgtggctctgaaggaatgcatcgagctttttactacaatggaa
actctaggagaacatgacccttggtattgtccaacatgtaaaaaacatcaacaggcaaca
aaaaagtttgacttatggtcgctgcctcgcattctggtcgttcacctgaagcgtttctcc
tacaaccgatgctggagggacaagctcgacacactggtggactttcccatcagggatcta
aacatgtcggagtttgtgtgtgacccaaaagcgggcccttacgtctacgacctcattgct
gtttcaaaccactatggaggaatgggaggcggtcactatacggcttatggcaagaataaa
atggatgggaagtggtattactttgacgacagcagcgtctcgtctgcctccgaagatcag
attgtgactaaagcagcctacgtgctcttctatcagcgcagagacgaggacagccccacc
aaagccgacccaccggcctcgctgggaggagccaccgagtcgggcgacgacaacatggac
acaaactga
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integrated database retrieval system
