Poeciliopsis prolifica (blackstripe livebearer): 129354857
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Entry
129354857 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04140
Autophagy - animal
pprl04148
Efferocytosis
pprl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129354857
04148 Efferocytosis
129354857
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129354857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129354857
Membrane trafficking [BR:
pprl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129354857
Hops complex
129354857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
129354857
NCBI-ProteinID:
XP_054880366
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MAFITANWNPLGDTFYRKTELYEMFWSLRDGLRDSLVAAAPYGGPIALLREPLRRSPSSR
PQLEIYSASGASITSFPWKSGPVVHLGWSVNDELLCXQEDGTVLIYDLFGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIEDLKLRRLPEVPGLQGKPSCWAVL
TQDRQTKVLVSSGPELYVLDNTSCTAVYPPGLSPQAGSIVHMSVSFSYKYLALFTETGRL
WTGLSNLQERLSEVDTKQAATPKQMVWCRRPRSQQPSVVLMWDRLLLVVGSCNDTIQFPL
EDQSVLVGELDGVRIIGSSSQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQNVLGDAVRQCVEAAAHEYDPDTQKALMRAASFGKCFLTEFSPDQFVTTCR
ELRVLNAVRESSVGMPLTHTQFKQMTLQVLIDRLVYRQFYPLAIEVCRYLKIPDYQGVSR
VLKHWASCKVQQKDLTDEAIARAVCAKVGDSPGVSYSDIAAKAYECGRPELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEPQTLKDLFNQDDDHQELGNFYVTSSYRDKRLEGRLAQLQSAVDEYNKAKND
FAAKATEEEMRLLRFQRKLDEEKGAGLLGLSLQATMEALMXVGLHKQAEQLYRDFRVPDK
RYWWLKLKSLAEKEQWEELEKFSKSKKSPIGYLAFVEVCMKNNNRHEAKKYVSKVTPEQK
VKAHLAVGDLDGAADAAIERRNESEMGAVLSRCSASDRLLMDKLNRARVATAKSDPIRPR
SDPIRANK
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggccttcatcaccgctaactggaacccgctgggagacactttctaccggaagacggaa
ctttatgagatgttctggagcctccgggacggactgagggacagtctggtggcagcagct
ccgtatggaggcccaatcgctctgctcagagaaccgctcagacgttcccccagctctcgt
cctcagctggagatctactccgcctctggagcgtccatcaccagcttcccttggaagagc
ggtccggtggtccacctgggctggtccgtcaacgacgagctgctgtgtngtcaggaggac
gggacggttctgatctacgacctgtttgggtccttcaagagacacttcagcatgggacag
gaagtggtccagtctcaggtgttggaggccaaggttttccactcgccatatggaacaggt
gtcgccatagtaacgggttcctcccgcttcaccctggcaaccaacatcgaggacttgaag
ctgcgcaggctacctgaggtcccaggtctccagggcaagccgtcctgctgggccgtcctc
actcaggacagacagaccaaagtcctggtgtccagtggacctgaactctatgttctggac
aacacgtcctgcacggctgtgtatcctccaggtctcagtcctcaggctggcagcatcgtc
cacatgtctgtctccttcagctacaaatacctggctctgttcactgagacgggacggctc
tggaccggcttgtccaacctacaggagagactgagtgaggtggacaccaagcaggcagct
acgcccaaacagatggtctggtgccgcaggccgaggtcccagcagccctcggtggtgttg
atgtgggaccggctcctcctggtggtgggatcttgtaacgacaccatccagttccccctg
gaggaccagtcggtgctggtgggcgagctggacggggttcggatcatcggctccagcagc
caggagctgctgcaggaggttcctctggtctgccaggacatctttaagatcgcctccatg
gctcctggagcgctgctgctggaggcccaccgggagtacgagaagtccagtcagaaggcg
gacgagtacctgagggagatcaaggagcagaacgtcctgggagacgccgtccggcagtgt
gtggaggcggccgctcacgagtacgaccccgacacccagaaggccctgatgagggcggcg
tccttcgggaagtgcttcctgacggagttcagcccggatcagtttgtgacgacctgcagg
gagctgcgggttctgaacgctgtcagagagagcagcgtggggatgccgctcacacacact
caatttaaacagatgacccttcaggtcctgatagacaggctggtctaccggcagttctac
cctctggccatcgaggtctgtcgctacttgaagatcccagactaccagggagtcagtcga
gtcctgaaacactgggcctcctgcaaggtgcagcagaaggacctgaccgatgaggccata
gcccgagccgtctgcgccaaggtgggagactcacctggagtttcgtactcggacatcgcg
gctaaagcctatgaatgtggacggccagagctggccatcaagctgctggacttcgaggcc
cggtccggggagcaggttcctctgctgctgaagatgaagaggagccagctcgctctcagt
aaagccgtggagagcggcgacaccgacctggtttacacggtggtgacgtacctgaaaaac
gagatgaacagaggagatttcttcatgacactgaggaaccagccggtggcgctcagcctc
tacagacagttctgcaaactgcaggagcctcagacgctgaaggacctgttcaaccaggac
gacgaccaccaggagctcggcaacttctacgtgacgtccagctacagggacaagagactg
gagggccggctggcacagctgcagagcgccgtggacgagtacaacaaggccaagaacgac
ttcgctgccaaggccacggaggaggaaatgcgtctccttcgtttccaaaggaagctggat
gaggagaagggggcggggcttctgggactctccctacaggccaccatggaggctctgatg
ntcgttggtctccacaagcaagcagagcagctctacagagacttcagagtgccggacaaa
aggtactggtggctgaagctgaagtctctggctgagaaggagcagtgggaggagctagag
aagttctccaagagcaagaagtctcctattggctacctggccttcgtggaggtgtgcatg
aagaacaacaacagacatgaagccaagaagtacgtcagcaaggtcacacctgagcagaag
gtcaaagctcacctggctgtgggcgacctagatggagcagcagacgccgccattgagcgc
aggaatgagtctgagatgggggcggtcctctccagatgctccgcctccgaccggctgctg
atggacaagttgaaccgggctcgggtcgccactgccaagagtgacccgatccggccaaga
agtgacccaatccgggccaataagtga
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