KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129354872
Entry
129354872         CDS       T09758                                 
Symbol
cstf1
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    129354872 (cstf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprl03019]
    129354872 (cstf1)
Messenger RNA biogenesis [BR:pprl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     129354872 (cstf1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WD40_Gbeta CSTF1_dimer Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_NOL10_N Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C WDR90_beta-prop_4th NBCH_WD40 Beta-prop_Aladin PAC11 WD40_RFWD3 ASA1 Beta-prop_DCAF4 CFAP251_N Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_NWD2_C Ge1_WD40 DSE1_N Beta-prop_SPT8 PROPPIN Frtz Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 129354872
NCBI-ProteinID: XP_054880380
LinkDB
Position
Unknown
AA seq 431 aa
MYRAKPTLKDRQHLYRLIISQLLHDGYTNIANNLINEVKPQSVVSPSEQLMQLAKIGMEN
DDSAVQYAIGRSDTVAPGVGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPSEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFLLVGTQHPT
LRLYDVNTFQCFVSCNPLDQHTDTISGVSYNPTANSYVTCSKDGSIKLWDGVSNRCVTTF
EKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGRQMHRTQGV
FNHTEDYVLLPDERTISLCCWDSRTAERKNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRATTD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtatcgcgctaagccgactctgaaggaccggcagcacctgtacaggctcatcatcagc
cagctgctccacgacggctacaccaacatcgccaacaacctgattaacgaggtgaagcca
cagagcgtcgtgtcgccttccgagcagctgatgcagctggcaaagatcgggatggagaac
gacgacagtgccgtccagtatgccatcggccgctcggacacagtagcgcctggtgttggc
attgacctggagtttgatgcggatgtccagaccatgtcaccagaggcgtcggagtacgag
acctgctacgtcacgtcccacaagggtccttgtcgcgtggccacgtacagccgggacggc
cagctgatcgccacaggctcggctgacgcctccatcaagatcctggacacggagcgcatg
ctggctaagagtgccatgcccatcgaggtgatgatgaacgagacggcgcagcagaacatg
gagaaccatcccgtcatccgtacgctttatgaccatgtggacgaagtcacctgcctggcc
ttccatccaagtgaacagattctagcatctggctccagagactacaccctgaaactgttt
gactactccaagccctccgctaaaagggcttttaaatatatacaggaagcggaaatgctg
cgttcgatctccttccacccctctggggacttcctgctggtgggaacgcagcaccctacg
ctgcgcctctacgatgtcaacactttccagtgctttgtttcctgcaatccgctggaccag
cacacggatacaatcagcggcgtcagctacaaccccaccgccaacagctacgtcacctgc
agcaaggacggcagcatcaagctgtgggacggcgtctccaaccgctgcgtcaccaccttc
gagaaggcgcacgacggagcagaggtgtgctctgccatcttctccaagaactccaagtac
atcctgtccagtgggaaggactccgtggccaaactttgggagatctccaccggtcggacc
ctggtcaagtacacgggggcggggctcagcggtcgtcagatgcaccgcacgcagggcgtg
ttcaaccacacggaggactacgtgctgctgcccgacgagcgaaccatcagcctctgctgc
tgggactccagaacagcggagaggaagaacctgctctccctgggccacaacaacatcgtc
cgctgcatcgtccattcacccaccaacccgggcttcatgacctgcagcgacgacttcagg
gcccgcttctggtaccgccgcgccaccacagactga

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