Poeciliopsis prolifica (blackstripe livebearer): 129354943
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Entry
129354943 CDS
T09758
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
129354943 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129354943 (hdac5)
Enzymes [BR:
pprl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129354943 (hdac5)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
129354943 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
129354943
NCBI-ProteinID:
XP_054880475
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MLLHPTMSGLCTMLQTIYETESCFSSASTDSHHQPLELLSDSRGSGADMTAAVLEVKSPL
PSGMQSPVEATCGGEGGVGVSGEGLVGGGGPVDLRTEPRLSSVSGGGAVDTALREQQLQQ
ELVLLKQQQELQKQLLFAEFQKKHEVLTRQHEVQLQEHLKQQQELLAAKRQQELEHKRKL
EQQRHEEQEKQRLEQQLLLLRNKEKGKESAIASTEVKLKLQEFLLSKKEPGPGGLNHSFS
SKCWGGQHTSLEQSSPPQSNTPGTSPSYKLPPLLGNYEGKDDFPLRKTVSEPNLKVRSRL
KQKVAERRSSPLLRRKDGTVISTFKKRAVEISVSSLCNSAPGSGPSSPNSSNSAIANGNT
GSVPNIQTELRSLHQTLGADGTLSPLTLYTSPSLPNISLGLPANTHITPPQKLSTQQEVE
RQAIQSLRGGGGLTGKFLSTSSLPAGAAHDVETPPPGSHSAHSSLLQHVLLLEQARQQTA
MLVPIYSQSPLVTAERGVATGMRPVNKLPRHRPLARTQSAPLPQSPQALQQLVVQQQHQH
FLEKHYKMLSKGGDLPRPPPTHPEETEEELTETNDMQEDESVALNSLQKEGSDDSSHSSE
RLASHLKGEEESRVLQVKGESTESELDEDEEDDDVIQLRESEEEERQSLQHLSVFSSSLP
HRPLGRAKSSPATAVNPIKHLFTTGLVYDSLMLKHQCVCGNAHIHPEHAGRVQSIWSRLQ
ETGLLSRCERIRGRKASLDEIQSVHSEFHTLLYGTSPLNRHKLDHKKLLGPISQKMYAVL
PCGGIGVDSDTVWNEMHSSAAVRMAVGSVIELAFKVAAGELKNGFAVVRPPGHHAEESTA
MGFCFFNSVAITAKLLQQKLGVGKILIVDWDIHHGNGTQQAFYNDPNVLYISLHRYDNGN
FFPGSGAPEEVGSGAGAGFNVNIAWTGGVEPPMGDVEYLTAFRSVVMPIAQQFSPDVVLV
SAGFDAVEGHQSPLGGYNVSAQCFGKLTQLLMGLAGGRIVMALEGGHDLTAICDASEACV
SALLGDLCDSGFQWPQEKPCPKACASLERVIDIQSKHWSCLQSASQTSGPSLLAGSPVAP
GQSERDEAETLSAMASLSVDVDQPGSVSENRESNRSTEEPMEEEPVL
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacatcccaccatgtcaggattgtgcaccatgctgcagaccatctacgagact
gagtcgtgtttttcctctgccagcacagacagccaccaccagcctctggagctcctgagt
gacagcaggggctccggtgctgacatgaccgctgctgtcttggaggtgaagagcccccta
ccatcaggcatgcagagtccagttgaagcaacatgtggtggtgaaggaggtgtcggtgtt
tctggagaaggcctagttggaggcggaggcccagtggacttgaggacagagccgaggttg
agctctgtgtctggtggaggagcagtggatacagccctgagagagcagcagcttcagcag
gaactcgtgcttctcaaacagcaacaggaactccagaagcagctgctatttgcggagttt
cagaaaaaacatgaagtgttaacgaggcagcacgaagtccagctgcaagaacacttaaag
caacaacaggagctgctggcagcaaagcggcagcaggagttggagcataagagaaaactg
gagcaacaaagacacgaagaacaggagaaacagagactggagcaacaactgttgctgctg
agaaacaaagagaaggggaaagagagtgccattgccagcacagaggtgaagctgaagctt
caggagtttcttctcagtaagaaagaacctggtcctggaggactcaaccattccttctcc
tcaaagtgctggggaggccagcacacgtctctagagcaaagctccccccctcagagcaac
acccctggaacctctccctcctacaaactcccccctcttctcggaaactacgagggtaaa
gacgacttcccacttcggaagacagtttcagagccgaacttgaaggttcgatctagactc
aagcagaaagtggcagagaggcgcagctctccattgttgcgcaggaaggatggaactgtc
atcagcaccttcaagaaaagggctgttgagatatcagtctcctccctttgtaacagtgct
cctggctcaggtcccagcagccccaacagttccaattcggccatcgccaacggcaacacg
ggatcagtccccaacatacaaaccgagctgagatctctccatcagactctgggggccgat
gggacattgagtcctcttaccctctacacctcaccgtccctgcccaatatttcccttggc
ctcccggccaacacacacatcacaccaccccagaaactgtccacccagcaggaagtagag
cgtcaggccatccagtccttacgagggggaggaggtctaactgggaagtttctctccact
tcctccctacccgcaggtgcagcacatgatgtggagactccgccccccggctctcattca
gcccattcctcgttgttgcaacacgtcctgttacttgagcaggcccgacaacagaccgct
atgttagtgcccatatacagtcagtcaccactggttactgcagagagaggtgtagccact
ggaatgcggcccgtcaacaagctgccccgccaccgaccgttggctcgcacacagagcgcc
cctttaccccagtcgccccaggcgctgcagcagctggtggtccaacagcagcaccagcac
ttcctggaaaaacactacaagatgctatcgaaggggggggacctcccaagaccaccaccc
actcaccctgaggagacggaagaggagctgacagagaccaatgacatgcaggaagatgaa
agcgtggctcttaacagcctgcagaaagagggatcagacgacagcagccactcatctgag
cgactggccagccacctgaaaggggaggaggaatccagggttctccaggtcaaaggcgag
agcacggagagtgagctagatgaagatgaagaggatgatgatgtcattcagctcagggag
agtgaggaagaggaaaggcagtccttgcagcatctcagcgtgttttcatcctcgctgccc
cacagacctctgggaagagccaagtcatcccctgcaactgctgtcaaccccatcaaacac
ctcttcaccaccgggttggtgtatgacagcctgatgctgaaacatcagtgtgtttgtggc
aatgctcacattcacccagagcatgctgggagagtccaaagcatctggtccagactgcag
gaaacaggcttactgagccgctgtgagaggattcgtgggagaaaagcatctctagatgaa
atccagtcggtccattcagagttccacaccctgctgtatggaaccagcccgctcaatcgg
cacaaactggaccacaagaagcttctgggtccaatcagtcagaagatgtatgcagttctg
ccctgtggaggaataggggtggacagtgacactgtgtggaacgaaatgcactcatcagca
gcagttcgcatggcagtgggctcagttattgagctggcctttaaggtggccgcaggggag
ctgaagaatggctttgcagttgtgcgtccacctggtcaccatgcagaggaatccacagcg
atgggcttttgcttcttcaactcagtagccatcactgccaagctgctgcaacagaagctt
ggtgtggggaagatcctcattgtggactgggacatacaccatggcaacggcacccagcag
gctttctacaacgatcccaatgtgctctacatttctctgcatcgctacgataatggaaac
ttctttcctggcagtggagcaccagaggaggtaggctcaggtgcaggagctggctttaat
gtaaatatagcatggactggaggagtagagcctcctatgggtgatgtggaatacctcact
gctttcaggagtgtggtaatgcccattgcccagcagttcagtccagatgtggtcctggta
tctgcaggctttgatgcagtggaaggtcatcaatctcctctgggtggctacaatgtttct
gcacaatgttttggtaagctaacacagctgctgatgggactagcaggtgggcggattgta
atggcgctcgagggtggccatgacctaactgctatctgtgacgcatcagaggcctgcgtt
tctgccctcctgggagatctgtgtgactctgggtttcagtggcctcaggagaagccatgt
ccaaaagcctgcgcgtccctggagagagtcatagacatccagagtaaacactggtcttgt
ctccagagtgcgtctcaaaccagtggcccctcgctcctggcagggtctcctgtggcccca
ggccagtctgagagagacgaggctgaaacactcagcgccatggcctcgctaagtgttgat
gtggaccagccaggctctgtttctgaaaacagagaatctaacaggtctacagaggagcca
atggaggaagagcctgtgttgtaa
DBGET
integrated database retrieval system
