Poeciliopsis prolifica (blackstripe livebearer): 129355288
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Entry
129355288 CDS
T09758
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129355288 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129355288 (rae1)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129355288 (rae1)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129355288 (rae1)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129355288 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_EIPR1
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_SPT8
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
129355288
NCBI-ProteinID:
XP_054880780
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MSLFGTGTSFGTGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIAG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLGVCWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIKSIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttcggaacggggaccagcttcggaaccggagggaccggtgtttttggaagc
acgacgactgacagtcataatcccatgaaggatgtcgaagtgacctcgcctccagatgac
agcatcagctgcctggcgttcagtcctccaaccatgccgggaaacttccttattgcggga
tcctgggcgaatgatgtgagatgttgggaggtgcaggacaatggacagaccgtccccaaa
gcccaacagatgcacacaggtccagtgctgggcgtctgctggagcgacgatggcagtaag
gtgttcaccgcttcatgcgacaagacggcaaagatgtgggatcttaacagcaaccaagcg
atgcagattgcgcagcatgacggtccaatcaaatcaattcactggataaaagccccaaac
tacagctgtatcatgactggcagctgggataaaacactgaagttttgggacacccgctcg
cccaaccccatgatgtccctgcagatgccagagcgatgctactgtgccgacgttgtgtat
cccatggcagtggtagccacagctgaaagaggccttatagtgtaccagttagagaaccag
ccttctgagtttcgcagaatagactcccctctcaaacatcagcaccgttgtgttgccata
tttaaggacaagcagaacaagccaacgggctttgcactgggaagcattgagggcagagtg
gcgatccattacatcaatccaccaaacccagccaaagataatttcaccttcaagtgccac
aggtccaatggaaccaacacaaccactccacaggacatctatgctgttaacgccatctcc
ttccatcctgtccacggcacgctggccaccgtgggctccgacggacgcttcagcttctgg
gacaaagacgcgcgcaccaagctgaagacctccgagcagctcgaccagccaatcacagct
tgctgcttcaaccacaacggcaacatcttcgcgtacgcctcgagctacgactggtcaaag
ggccacgagtactacaacccccagaaaaagaactacatctttctgaggaacgccgctgag
gagctgaagcctcggaacaagaaatggtga
DBGET
integrated database retrieval system
