Poeciliopsis prolifica (blackstripe livebearer): 129355325
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Entry
129355325 CDS
T09758
Symbol
zfr
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprl03041
]
129355325 (zfr)
Spliceosome [BR:
pprl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129355325 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
129355325
NCBI-ProteinID:
XP_054880809
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAAAVAVARPAPVAVAAATAAAYGGYQPTHTTSDYGYPQRQAEV
PPPPPPVTSQNYQDSYSYVRSTASAVAYDSKQYYQQPSVTAAVAAAQPQPSVADSYYQTA
PKPVYSQGVTSYTQSQQNRQVTVIKPAAASPASSTFSIFPVTSTVQPVAAAAASVVPSYS
QSPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQKQAVAAVAATAAWSGNPFPKKP
TFQSKQLRPKQPPKPTQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQGSSSST
AGGTLARNAQNQLRCELCDVSCTGADAYAAHIRGAKHQKVWMLXKLHTKLGKPIPSTEPS
MIAQTSASGASATGKTSLSSSSTSSALCLSSNSSSSSSAPYLKAVNITSSSVVTKNPLAS
SLSVASSAAPGKKVNTPKINFVAGSKLQTTGKMEEMREEIKGDTCKPAAPSSASPDAKAD
LCDSLSTSALIALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGR
RHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMXKQMQKEEYWRRREEEERWRMEMRRYEE
DMYWRRMEEEQHHWDDRRRMSDGGYIQGPPGPPGLLGVRPGLPGLQPQGPMPPRRPDSSD
DRYIMTKHAAIYPSEEELQSIQKIVSITERALKLVSDIITDQEHDKEDDKEKKEPAKDRV
LKGVMRVGVLAKGLLLRGDKNVNLVLLCSDKPTESLLACIVEHLPKQLTLVTPDKYEVKG
SMEEAAIFLTSCIEPKMQVTITLTSPVIREEPGREGDVTSGMVKDPADVLDRQKCLDALA
ALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSPFPGWAMELLVEKAINSASAPLGP
GDALRRVFECISSGILLPGGPGLLDPCEKKPVDTLTAMGEQQREDITSSAQFALRLLAFR
QIHKVLGMDPLPQMNPRFNVRNSRKRRHDNSDGTDSFEGEGKKDKKDFDN
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgtccagtggtctccttcacctatgtgcccagccggcttggtgaagat
gccaaaatggctaccggcaattatttcggatttacgcatggcgccgcagctcagtacagc
cagcagccagccgcaggggtagcatacactcatcccaccactgtggccagttacacagtt
catcaggcaccggtggcagcacacactgttgcagcagcctatgcacccactgcagctgcc
gttgccgtggcaagacctgcgcctgttgccgtggcagctgcaactgctgccgcttatgga
ggataccagccaacccatactaccagtgattatggctacccacaacgccaggcggaggtc
cctccaccccctccgccagtcacctcacagaactaccaggactcttactcgtatgtccgt
tccacggcttcagctgtagcttatgacagtaagcagtactaccagcagccttctgttaca
gcagctgttgctgctgcacagccgcagcccagtgttgcagactcttactaccagacagct
cccaaacctgtatatagtcaaggtgtaacatcctatacccagagccaacagaatcgccaa
gttactgtcatcaagccagctgctgccagtccagcttcatccaccttctccatcttcccg
gtgacctccactgttcagccagtggcagcggctgcagcctcagttgttccctcttactcc
caaagcccaacatacagcaccaatgctgtcacctactctggaacgtcgtactcaggctat
gaagcagctgtgtactcagcagcctccagctactaccagcagcagcagcagcagaagcag
gcagttgcagcagtggcagcaacagctgcctggtcaggaaaccctttccctaagaaaccc
acattccagagtaagcagcttcgacccaagcagccacccaaacccactcagatacactac
tgtgatgtctgcaagatcagctgtgctggcccacagacttataaagagcatttggaaggc
cagaagcataagaagaaggaagcagcactgaaagtgtcacaggggagcagcagcagcact
gcaggagggacgctggctcggaacgctcagaaccagcttcgctgtgaactttgtgatgtt
tcgtgcactggagctgacgcttatgccgcccatattcgaggagccaagcaccagaaggtt
tggatgttgtgaaaactccataccaaacttggaaagcccattccttccacagagcccagt
atgatcgctcagacatcagcctcaggtgcttctgctactggcaagacctcccttagcagt
tccagcacttccagcgctttgtgtctgtcttccaactcttcctccagctctagcgccccc
tatctgaaagctgtcaacataaccagcagcagtgtggttaccaagaatccactggccagc
agtctctctgttgccagttctgcagcacctggcaagaaagtcaacactccaaagattaat
tttgttgctgggagtaaattacagacaacaggaaagatggaggagatgagagaagaaatc
aaaggcgatacttgtaagccggccgcaccctcttctgcttccccagatgctaaggctgat
ctctgtgattctctatccacatcggcacttattgctttgcagagtgacgtccagcctgtt
ggtcatgactatgtggaagaagtcagaaacgatgaaggcaaagtcattcgctttcactgc
aagctgtgtgaatgtagcttcaacgatcccaatgcaaaggaaatgcacctgaaaggacgg
aggcatcgcctccagtataagaagaaggtaaatcccgatctgcaggtagaagtcaagccc
agcatccgagcccgaaagattcaggaagaaaagatgnagaaacagatgcagaaagaagag
tactggagaagaagagaagaagaggagcgctggaggatggaaatgaggcgatatgaagaa
gacatgtactggagacgtatggaggaggagcagcatcactgggacgatcggcgtcggatg
tctgatggggggtacatacaggggcccccgggccctcctggtcttctaggagtccgacca
ggtctgcctggtctgcagccacaaggtcccatgccgccccgtcgtccagattcttctgat
gaccgatacatcatgaccaagcatgcagccatttacccatctgaagaggagctccagtcc
attcagaaaatcgtgtcaattacagagcgagccctgaaacttgtctctgacataatcaca
gatcaggaacacgacaaagaggacgataaagagaagaaggaaccggccaaagacagagtc
ctaaagggtgtgatgagggttggtgtcctggctaaaggccttctgctccgtggagacaag
aatgtcaacctcgtgctgctctgctctgacaagcccacagaaagtctgctggcctgcatt
gtggaacacctccccaaacaactaacgctagtaacgccagacaaatatgaggtcaaggga
tcgatggaggaagcggctatcttcctaacatcttgcatcgagccgaagatgcaagtgaca
atcactttaacttcaccggtcatcagagaggagccgggccgggaaggagatgtaacctcg
ggtatggtgaaagacccagcggacgtcttggacaggcaaaaatgccttgacgctctggct
gctctgcgccacgctaagtggttccaggctagagccaatggtcttcagtcctgcgtgatc
atcatccgaatcctgagagacctttgtcagcgagtccccacatggtcacctttcccagga
tgggcaatggaactgctggttgagaaggccataaacagcgcctcagctcctctcggccct
ggtgatgcactgagacgtgtctttgaatgcatttcttctggaattttacttcctggtgga
ccagggttgttagatccgtgtgagaagaagcctgtggataccctcactgccatgggagag
cagcagagagaggacataacctccagtgctcagtttgctcttaggcttctggcgttccgt
caaattcacaaagttctgggtatggatcccttaccgcagatgaaccctcggttcaacgtt
cgcaacagccgaaaacgccgtcatgacaacagcgatggaacagacagctttgaaggggaa
ggcaaaaaagacaaaaaagattttgataattaa
DBGET
integrated database retrieval system
