Poeciliopsis prolifica (blackstripe livebearer): 129355409
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Entry
129355409 CDS
T09758
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129355409 (sox1b)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129355409 (sox1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
SelP_N
Motif
Other DBs
NCBI-GeneID:
129355409
NCBI-ProteinID:
XP_054880947
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MYSIMMETDLHSPVVPQTNPSNPGGHAGGGGGGPAGKVPQERIKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKT
LLKKDKYSLAGGLLGSSPGVGMGGGQRLESPGAGHVGASAGYASHVNGWANGTYSGQVAA
AAAAAHAMMQEAQLAYTQHPGSGAHPHHHPHHHHHHPHHHPHNPQPVHRYDMSALSYSPI
SNSQSYMSASPPGYGGITGYTHQHQSSGVSPVSGAIGGTLGSLVKSEPSVSPPVSTARAP
PPCPTGDLRDMISMYLPAGEAAGGDSVQSRLHVLHPQHYQSGGSAAVNGTVPLTHI
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggagacggacttgcattcccccgtggtgccccagaccaaccca
tcgaacccggggggacatgcgggaggaggaggcggggggcccgcagggaaggtcccccag
gagaggatcaagagacccatgaacgccttcatggtgtggtcccggggccagcggaggaaa
atggcacaggagaaccccaagatgcacaactcggaaatcagcaagaggctgggcgcggag
tggaaggtgatgaccgaggcggagaagagacccttcatcgacgaggccaagcggctccgg
gccatgcacatgaaggaacacccggactacaagtaccgcccgcggaggaagaccaagact
ttactcaagaaggacaagtattcacttgccggcggactcctcggttcgtcgccgggtgtt
gggatgggcggcgggcagcggctggagagccccggtgcgggacacgtgggggccagtgcg
ggctacgcgtcgcatgtgaacggctgggcgaacgggacgtactcgggtcaggtggcggcc
gcagcggcggcggctcacgccatgatgcaggaggcgcagctggcgtacacccaacacccg
ggcagcggggctcacccgcaccatcacccgcaccaccaccaccaccacccgcatcaccat
ccgcacaacccgcagccggtgcacaggtatgacatgagcgctttgtcttacagcccgatc
tcgaactcgcagagctacatgagcgcctctccgccgggctacggcggcatcaccggctat
acccaccagcaccagagctccggggtctcccccgtgtccggggccatcggagggactcta
ggttctctcgtgaaatcggagccgagcgtcagcccgcccgtttccacggcgcgcgcaccg
ccgccgtgccccacgggagacctgcgggacatgatcagcatgtatctgcccgctggcgag
gcggcgggcggcgactccgttcaaagcagactgcatgtgctgcacccgcagcactaccag
agcgggggctccgccgcggtcaacgggacggttcccctcacgcacatttaa
DBGET
integrated database retrieval system
