Poeciliopsis prolifica (blackstripe livebearer): 129355417
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Entry
129355417 CDS
T09758
Symbol
cxxc1b
Name
(RefSeq) CXXC-type zinc finger protein 1b
KO
K14960
COMPASS component SPP1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129355417 (cxxc1b)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129355417 (cxxc1b)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
129355417 (cxxc1b)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
129355417 (cxxc1b)
COMPASS/SET1 complex (yeast)
129355417 (cxxc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
129355417
NCBI-ProteinID:
XP_054880961
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MDSELSDVDTAPGPEGSGMEGENAPLYCICRKPDINCFMIGCDNCNEWFHGHCISITEKM
AKAIQEWYCMSCRDENPLLEVKYRSKKSREKEPDSDRTERQYSTPSTPDYKSDRRRGSKV
KRSVRMCGECEPCRRTEDCAQCDFCKDMKKFGGPNKIRQKCRFRQCEVRARKMLRVKEEE
LSLRERRENSHHRRRRYSEDYDSEVELYQQYRAAGLGGDLAWGSDDDDEPAFSPVMRKKA
IKVKHVKRREKKIEKKKESRRHKQKQKHRDKNRHSERGDLRDSGGMRQCLGPNCVKGARP
NSKYCSEDCGMKLAANRIYEILPQRIQQWQQSPCIAEEHGKKQLERIRRDQQNARLRLTD
MERRFHELEGIIAKAKQQAVQQDEEVNEGEGDDTDLQIFCVSCGHPINPKVALRHMERCY
AKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPVDEVCGC
PLVKNVFEPTGDYCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAM
TNRAGLLALMLHQTIQHDPLTTDLRSNKDR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgagctgtcggacgtggacactgcaccgggccccgagggcagcggcatggag
ggggagaacgctccgctttactgcatttgtcgaaagccagacatcaactgcttcatgatc
ggctgcgacaattgtaacgagtggttccacgggcactgcatcagcatcacggagaagatg
gccaaggccatccaggagtggtactgcatgagctgcagagacgagaacccgctgctggaa
gtcaaatacagatccaagaaaagccgagagaaggagccggactcggacagaaccgagcga
cagtacagcacgccgagcacgccggactacaaaagcgacagacggcgcggatctaaagtg
aaacgctcggtgcgcatgtgcggggagtgcgagccgtgcaggcggaccgaggactgcgcc
cagtgcgacttctgcaaggacatgaagaagttcggagggcccaacaaaatccgacagaag
tgccgcttcaggcagtgcgaggttcgagccaggaaaatgctgcgcgtaaaggaggaggag
ctctccttgcgtgagaggagggagaactcccaccacagaagaagacggtactccgaggat
tacgacagcgaggtggagctctaccagcagtacagggcggcgggactcggtggcgacttg
gcgtgggggagcgatgacgacgacgagccggccttcagccctgtcatgcggaagaaagcc
atcaaggtgaagcatgtaaagaggcgggaaaagaagatcgagaaaaagaaagaatcgcgg
cgccacaagcagaagcagaagcacagggacaaaaaccggcacagcgagcggggggatctg
cgggacagcggggggatgcgtcagtgtctggggcccaactgtgtgaaaggagccaggccc
aactccaagtactgctccgaggactgcggcatgaagctggcagccaaccggatctacgag
atcctccctcagcggatccagcagtggcaacagagtccctgcatcgccgaggagcacggc
aagaagcagctggagcgcatccgccgggaccagcagaacgcccggctccgcctcaccgac
atggagcggcgcttccacgagctggagggcatcatcgccaaggccaagcagcaggcggtt
cagcaggacgaggaggtgaacgaaggtgagggcgatgacacagatctccagattttctgc
gtgtcctgcggtcatcccattaatccgaaagtggcgctgagacacatggagagatgctac
gccaagtacgagagccagacgtcctttggttccatgtatccaacaaggatagagggtgcc
accagactcttctgtgacgtgtacaacccccagagcaagacctactgcaagaggctgcag
gttctgtgtccagaacattccagagatccaaaggtgccggtagacgaggtgtgcggttgc
cctctagtgaagaacgtgtttgagccgacaggagactactgcagggtgtccaaaaggaaa
tgcaacaaacattacaactgggaaaagctgaggagggctgaggtggacttggagcgggtc
agagtgtggtacaagctggacgagctatttgagcaggagcgaaacgtcaggaccgcaatg
accaacagggccggtctgctggctctgatgttgcaccagaccatccagcacgacccgctg
acgactgatctccgtagcaacaaggataggtag
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