Poeciliopsis prolifica (blackstripe livebearer): 129355418
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Entry
129355418 CDS
T09758
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04136
Autophagy - other
pprl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129355418 (atg13)
04136 Autophagy - other
129355418 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129355418 (atg13)
03029 Mitochondrial biogenesis [BR:
pprl03029
]
129355418 (atg13)
Membrane trafficking [BR:
pprl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
129355418 (atg13)
Atg1 complex
129355418 (atg13)
Mitochondrial biogenesis [BR:
pprl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129355418 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
129355418
NCBI-ProteinID:
XP_054880958
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MDGDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLGGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSSRQFERSAPIMGIIVDHFVDAPCGNQRPITMGQLCNYRPPDED
DGGAFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLQLPLAPGLVTHNL
YASRLSYQPAPPGGAAEFNTNQVKEGGNVLVPAQPQPPHGADVHLTIENAPNTPSSSGDE
DGLLQSGEGRRDDGRRSVSPSDPVESLNAFTRKVGAFVNKPNTQITAASLDLPFAAFAPR
GLDSEENDPMVRPPDSPPSQSPLQASLHSQGSDGSGPQDDFVMVDFRPAFSKDDLLPMDL
GTFYREFQNPPQLASLSLHTSSQSMADDLDSLPEKLRVYEKNIDEFDAFVDMLQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgacctgagtccacaggataagaaagacttggacaagttcatcaagtttttt
gccttaaagactgttcaggtgatcgttcaagctcgcctgggggagaagatctgcactcgc
tcgtcttcgtcacccactggctcagactggtttaatttggccatcaaagacatcccggag
gtcactcatgaggccaagaaggcgctggccggccagcttccaggcatcggccgctccatg
tgtgtggagatctccctgaagacctcagagggagactccatggagttagagacttggtgc
ctggagatgaatgagaagtgtgataaggacattaaagtgtcgtacaccgtctataatcgc
ctgtctgtcctcctaaaatctctgctggccatcaccagagtgactcccgcctataagcta
tccagaaagcaaggccacgactacgtcatattatacaggatctactttggggaagtccag
ctgggtggattaggagaaggtttccaaacggtgcgcgtcggtgttgtcggcaccccggtc
ggcacggtaacgctgtcatgtgcctaccgcaccaacctggcgttcatgtccagcaggcag
tttgaacggtcggctcccatcatgggaatcatcgtggatcactttgtggacgcgccctgc
ggcaatcagcgtccaatcacaatggggcagctctgcaactacagacccccagatgaggac
gacggcggagcgtttgctggcgttcaggactcgcaggaggtctgtaccacctctttctcc
acctcccctccctctcagtgtgtctgcactctgagtccatccccttccaaactgtccaaa
cccctcccgctggacagtctccagctcccattggctccaggacttgtcactcacaatctc
tatgcttccaggttatcctaccagcctgcacctccaggaggagctgctgagttcaacaca
aaccaggttaaagaaggagggaatgttctggttccggctcagcctcagccgcctcatgga
gcggatgtccatctgaccatagaaaacgctccaaacacaccgagcagcagtggcgatgaa
gacgggctgctgcagagcggtgagggaagaagggacgatgggaggaggagcgtctctccc
tctgacccagtggagtccctcaatgcattcacaaggaaggttggggcttttgtgaataaa
cccaacactcagataacagctgccagtttggatctcccattcgctgcatttgctcctcgt
ggcctggactctgaggagaacgatcccatggtgcgtcctccggattctcctccttcccag
tcgcccctgcaggccagccttcactctcagggctcggacggatcgggaccgcaggacgac
ttcgtcatggttgactttcgtccagctttctctaaagatgaccttttgccgatggatctg
ggcactttctatcgagagtttcagaaccctccacagctggccagcctctcgctgcacacc
agctcccagtcgatggctgacgacctggactcactgccggagaaactgcgtgtctatgag
aagaacattgacgaatttgacgcgtttgtggacatgctccagtag
DBGET
integrated database retrieval system
