Poeciliopsis prolifica (blackstripe livebearer): 129355443
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Entry
129355443 CDS
T09758
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129355443 (traip)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129355443 (traip)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129355443 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
KASH_CCD
zf-RING_11
zf-C3HC4_4
zf-RING_Vps41
RING_XB3-XBAT31
AAA_13
zf-RING-like
WEMBL
zf-RING_16
Gp58
Zn_ribbon_8
RINGv
Crescentin
Spectrin_Anc-1
bZIP_1
DUF4055
HIP1_clath_bdg
CENP-F_leu_zip
OVT1
Lzipper-MIP1
zf_RING_Vps8
Aminoglyc_resit
ANIS5_cation-bd
Fez1
GAS
4HB_KIF14
FANCL_C
zf-Nse
PEARLI-4
DUF5955
CALCOCO1
SLX1_C
Laminin_II
CC2-LZ
DUF730
APG6_N
TPR_MLP1_2
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
129355443
NCBI-ProteinID:
XP_054881006
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MPIRAYCTICSDFFDHARDVAAIHCGHTFHYECLLQWFQTAPTKTCPQCRKQVSTRHIIN
KLFFDIGGEGEEGSVDPESLQNEVDRMKALLSSKDRDWREKQKAMDGLKDTVNKQRRDLD
AVRKEVMEKEMVCVALKKQMVYLETQQNEIHAAKEEIRRLRGKMKTLEGLDMLLQGQRGE
VESMITDMGVSQAAVEQLSIYCISLKKEYDDLKGSLKSSNDMCEKLKREVLSSNSKLEKA
SREALLLKEELKSLQKDLAGADKEISSLKKKVEFLQKTLSTPTRTNEALSRLVFESPAPL
ELKPPHHHQPARGDDIDLNMTYDIATPDDTSKRPSQVPSKKMRLGTSSSKHSEKLSSLSK
NEDSTLDPFLRNSLLFRKKTFGSMLDPQKKAGVVQTGYDGLGGRTKFIQPSPLSEIRPLL
KAKRKKVTRPPSKIPTCLTLDSFLE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcccattagagcctattgtacgatctgctccgacttctttgatcacgccagagacgtg
gctgccattcactgcggacacacttttcactacgaatgtcttcttcagtggtttcagacc
gctccaaccaaaacctgtcctcagtgcagaaaacaggtcagcaccagacacatcatcaac
aagctgttctttgacattggaggagagggggaggaagggtctgtggacccagagagcctg
cagaatgaggttgatcgaatgaaggcactgctgagttctaaagatcgagactggcgggag
aaacagaaggcgatggacggcttgaaggacacggtgaacaagcagaggagagacctggat
gccgtgcggaaagaggtcatggaaaaggagatggtctgcgtcgctctcaaaaagcagatg
gtgtatttggagacgcagcagaacgaaattcacgcagcgaaggaggaaatccgcagactg
aggggcaaaatgaaaaccttggaaggcctggacatgctgctgcagggtcagcgaggcgaa
gtggagtccatgatcacagatatgggtgtgagccaggcagcagtggagcagctctctatt
tactgcatctctctgaagaaagaatatgatgacctcaaaggaagcctcaagtcttcaaac
gacatgtgcgagaagctgaagcgagaagttctctcctcaaacagcaagctggagaaggct
tcccgggaggcacttctgctcaaagaggagttgaagtctctgcagaaagacctggccggc
gccgacaaggagatctcgagtctcaagaagaaagtggagtttctccagaagactctgagc
acgccgacccgcaccaacgaagccctcagcaggctcgtcttcgaaagcccggcgcctctg
gaactgaagcccccccaccaccaccagcccgcgcgcggagacgacatcgacctcaacatg
acctatgacatcgccacgcctgacgacacgtcaaagagaccgtcccaggttccctcgaag
aagatgcggctgggaacgtcttcttcgaaacacagcgagaaactttcctccctgagcaag
aatgaagattcaacgctcgatccttttctgaggaactccctcctcttcagaaagaagact
ttcggaagcatgttggaccctcagaagaaggctggagtcgtccaaactggctatgatgga
ttaggaggacggactaaattcatccaaccttctcctttatccgagatccggcctctgctg
aaagccaaaaggaaaaaagtgactcggcctccctctaagattccaacatgtctgactctg
gacagcttcctggaatga
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